Query= MSMg01no526_f01.b1 MSMg01no526_f01.b1 CHROMAT_FILE:
MSMg01no526_f01.b1 PHD_FILE: MSMg01no526_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:12 2005
(658 letters)
>mm_chr2_38486554_38487611
Length = 1058
Score = 1241 bits (642), Expect = 0.0
Identities = 653/660 (98%), Gaps = 6/660 (0%)
Strand = Plus / Minus
Query: 5 gaattcaccaggttcaggacatttcacttgtttttgtttttgctgttttgagacatcatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 gaattcaccaggttcaggacatttcacttgtttttgtttttgctgttttgagacatcatt 764
Query: 65 tcgttctagccctggctgtcctggaactcaatctgtagatcaggtggccacggactcaag 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ttgttctagccctggctgtcctggaactcaatctgtagatcaggtggccacggactcaag 704
Query: 125 agatcatctgcctctgcttccttgctgctgggattaaaggtgagtgctctccctgcttgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 agatcatctgcctctgcttccttgctgctgggattaaaggtgagtgctctccctgcttgg 644
Query: 185 caggacatataacattgataccaagcatttttaaaatggaaaatagagcacccttctctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 caggacatataacattgataccaagcatttttaaaatggaaaatagagcacccttctctt 584
Query: 245 gcatttggactgtagtggtttgccacatgctgactttaggaaaagttgtttgaagtaagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gcatttggactgtagtggtttgccacatgctgactttaggaaaagttgtttgaagtaagc 524
Query: 305 agtcaagtgcctattttgcttgtgcttgccgtggtcttaggctgttaggaacttaattga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 agtcaagtgcctattttgcttgtgcttgccgtggtcttaggctgttaggaacttaattga 464
Query: 365 gctcaggtccacaactgaatttgtagaatatttcttctttctcactcactcatgtacaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gctcaggtccacaactgaatttgtagaatatttcttctttctcactcactcatgtacaca 404
Query: 425 ca------cacactcacactcacaagctttgtgacaagtccttgttcactctgtaaccct 478
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cacacactcacactcacactcacaagctttgtgacaagtccttgttcactctgtaaccct 344
Query: 479 ggctgatctggaacttgctttagaccacattggccttgacctcacagaaatccacctgcc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggctgatctggaacttgctttagaccacattggccttgacctcacagaaatccacctgcc 284
Query: 539 tctgctgtctgagtgctgagattaaaggtgcttaccacctgcccagcttgtaagatattt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tctgctgtctgagtgctgagattaaaggtgcttaccacctgcccagcttgtaagatattt 224
Query: 599 cttctttagctcatttactctacactgtctgcttttgctgtgcagtaagactaatgcacg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cttctttagctcatttactctacactgtctgcttttgctgtgcagtaagactaatgcacg 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_f01.g1 MSMg01no526_f01.g1 CHROMAT_FILE:
MSMg01no526_f01.g1 PHD_FILE: MSMg01no526_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:12 2005
(647 letters)
>mm_chr2_38348087_38349133
Length = 1047
Score = 1162 bits (601), Expect = 0.0
Identities = 637/649 (98%), Gaps = 2/649 (0%)
Strand = Plus / Plus
Query: 1 cggcttctgcgtgggcttgtggagccagagtgtctccatgcagccaagaagtgggaacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cggcttctgcgtgggcttgtggagccagagtgtctccatgcagccaagaagtgggaacga 260
Query: 61 agcttctgaagggttctggtaccctggtacccacacctgcgggaagagatgagctgcagg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcttctgaagggttctggtaccctggtacccacacctgcgggaagagatgagctgcagt 320
Query: 121 gctctggtagaggctgtaagaggctgaggtagggcactgtgtttgtcagggtttctctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctctggtagaggctgtaagaggctgaggtagggcactgtgtttgtcagggtttctctgg 380
Query: 181 gttctctccaccagcttcctgcatgggcaggcagtggaatagaaggaagggatacttgag 240
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttctcttcatcagcttcctgcatgggcaggcagtggaatagaaggaagggatacttgag 440
Query: 241 gacagcctccagcctcttgtctgtctgtctgtgcttctgtctctctcgtgtacacatact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacagcctccagcctcttgtctgtctgtctgtgcttctgtctctctcgtgtacacatact 500
Query: 301 cacacatgcacagaaacagggttctagactgtgaatctgaagctttgaggaaggaagagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacacatgcacagaaacagggttctagactgtgaatctgaagctttgaggaaggaagagt 560
Query: 361 ttgcctacagtttcatcagccccattgcatcctcacttcaggaaagggcgcagaagtcag 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgcctccagtttcatcagccccattgcatcctcacttcaggaaagggcgcagaagtcag 620
Query: 421 tggttctgtcctcctgacacaggtgggcagtggaaggaccctctgcatatattcacttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggttctgtcctcctgacacaggtgggcagtggaaggaccctctgcatatattcacttca 680
Query: 481 taaatgggtatcacctgtcgctctaagattagaaatatagtcccgtgcttcaaggggctt 540
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 681 taaatgggcatcacctgtcgctctaagattaaaaatatagtcccgtgcttcaaggggctt 740
Query: 541 gctttccaaaggggagagagacaatagccacacat-taagtgtgtcatgtcatgacaggt 599
||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 741 gctttccaaagggtagagagacaatagccacacacataagtatgtcatgtcatgacaggt 800
Query: 600 gtcatgaagagcatcagagatgatagcctggctaaa-aaccaagctgag 647
||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 801 gtcatgaagagcatcggagatgatagcctggctaaataaccaagctgag 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
