GXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGGATCCGCGGAATTCTAAAC
TTTATTTTTCCTAGGTACAGAGAAAGTCAAATTAGTAGTCAGTGGTTGCT
ACTAATCACTATTTTATCCCTAATTCAATTTCAGCCATGGAGAACAAAGT
AACTTTTTAAAAAAACACCAAAGGGAAAAACTGTCAAGAAAATAATGCAG
GAGGAAATCCTATTTTTGCTAATAAATTCTATTTCTGGAAACCAGCCTTA
GGAAGGAGACAACAAATAGTTAGCCTAAATCTCCATATGTAAATATAAAT
GGGGGACTCTAGGTAAAATTTAACATCCAAAGCAGGCAAAAACTGTATTA
AATTATGTGTGGTACATATAGGAGCTAAAATATTGATTATATAGGAGTTA
ATAGCGGTTAAGAAATCATAAAATAACATAATAACAAATAAAAAAGAAAA
GTAAACAATATTTGAGTAACTATAAACAGAGTTTTAATGCACACACACAC
GCACACACACACACACACACACACACACACACACACACACACACACACAC
ACACAAGACCAGAAGGAAATACAAAACTACTACAGTATATGGATTAAATG
GTGTAGGTCATTCTCTTTTTGCTAATGACCTATCTGAATTTTTTTGTATG
TGTCATATTTACAGATTAAAGCATTCTGACACTCTTTTAATTAAAAAACA
ACAAAAAAAACTTTAGTTTTGAAAGAAATGAAGATTTCTAAACATCCTAT
G

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTTGTTTAGCTCTTTACCCCATTTTTTTTTCTTTT
CCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAA
AAGTCCCCCATAGCCACCCACCCCTACTCCCCTACCCACCCACTCCCCCT
TTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCGTGTCC
AATGGGCCTCTCTTTCCAGGGATGGCAGACTAGGCCATCTTTTGATACAT
ATGCAGCTAGAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGT
TCCACCTACAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAG
CTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGAGCATC
CACTTCTGTGTTTGCTACGCCCCGGCATAGTCACATTTTTAATGGGGTTA
TTTGAATTCCTGGAGTCCAGCTTCTTGAGCTCTTTGTATATATTGGATAT
TAGTCCCCTATCAGATTAAGGATTGGTAAAAATTCTTTCCCAATCTCTTG
GTGGCCTCTTTGTCTTATTGACATTGTCTTTTGCCCTGCAGAAGCTTTGC
AATTTTATGAGATCCCATTTGTCGACTCTTGATCTTACAGCACAGGCAAT
TGCTGTTCTGTTTAGGATTTTTTCCCCTGTACCCATATCN

Query= MSMg01no526_j02.b1 MSMg01no526_j02.b1 CHROMAT_FILE:
MSMg01no526_j02.b1 PHD_FILE: MSMg01no526_j02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:32 2005
         (666 letters)



>mm_chr2_106324872_106325938
          Length = 1067

 Score = 1131 bits (585), Expect = 0.0
 Identities = 635/661 (96%), Gaps = 16/661 (2%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattctaaactttatttttcctaggtacagagaaagtcaaattagtagtcagtggttgc 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gaattctaaactttatttttcctaggtacagagaaagtcaaattagtagtcagtggttgc 598

                                                                       
Query: 67  tactaatcactattttatccctaattcaatttcagccatggagaacaaagtaacttttt- 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 597 tactaatcactattttatccctaattcaatttcagccatggagaacaaagtaacttttta 538

                                                                       
Query: 126 aaaaaaacaccaaagggaaaaactgtcaagaaaataatgcaggaggaaatcctatttttg 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aaaaaaacaccaaagggaaaaactgtcaagaaaataatgcaggaggaaatcctatttttg 478

                                                                       
Query: 186 ctaataaattctatttctggaaaccagccttaggaaggagacaacaaatagttagcctaa 245
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 477 ctaataaattctatttctggaaaccagccttaggaaggagacagcaaatagttagcctaa 418

                                                                       
Query: 246 atctccatatgtaaatataaatgggggactctaggtaaaatttaacatccaaagcaggca 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 atctccatatgtaaatataaatgggggactctaggtaaaatttaacatccaaagcaggca 358

                                                                       
Query: 306 aaaactgtattaaattatgtgtggtacatataggagctaaaatattgattatataggagt 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aaaactgtattaaattatgtgtggtacatataggagctaaaatattgattatataggagt 298

                                                                       
Query: 366 taatagcggttaagaaatcataaaataacataataacaaataaaaaagaaaagtaaacaa 425
           | |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 297 tgatagaggttaagaattcataaaataacgtaataacaaataaaaaagaaaagtaaataa 238

                                                                       
Query: 426 tatttgagtaactataaacagagttttaatgcacacacacacgcacacacacacacacac 485
           |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||
Sbjct: 237 tatttgagtaactataaacagagttttaatgcacacacacgcgtgcacacacacacacac 178

                                                                       
Query: 486 acacacacacacacacacacacacacacacacacacaagaccagaaggaaatacaaaact 545
           |||||||||||||||||||||               ||||||||||||||||||||||||
Sbjct: 177 acacacacacacacacacaca---------------aagaccagaaggaaatacaaaact 133

                                                                       
Query: 546 actacagtatatggattaaatggtgtaggtcattctctttttgctaatgacctatctgaa 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 actacagtatatggattaaatggtgtaggtcattctctttttgctaatgacctatctgaa 73

                                                                       
Query: 606 tttttttgtatgtgtcatatttacagattaaagcattctgacactcttttaattaaaaaa 665
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 72  tttttttgtatgtgtcatatttacagattaaagcattctgacactctttaaattaaaaaa 13

            
Query: 666 c 666
           |
Sbjct: 12  c 12


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1067
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1057
Effective search space:   693392
Effective search space used:   693392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)