XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTATGTGGGATATGGTTCATTACTCATTCACCTCCATTTTCTAGATAAAA
CAGTGAATGTGGTAAAGTTAAAAGGTTAGCCCAATATCACACATCCATAA
TGAGCAGGACTGAAATACAAACCTACGATAGTCTCTGGGTCTACATTCTC
TGTAAATGCGGTACAGTGTACCATCTCTCTAATTTTATAGTTCCAAAGTT
TCTCTCCTGTATAAATTATTGCTAGGATTCTCTGAACCCTATTGTTACAG
CCTCACCCTAGCCTGTCAATATAGAGAAGATGCAATTATGGATAGTCTCT
AACATACCCTGTATTGTGCCTTAGCATTCCTGTCTGAGAAAACTTGAGGT
TGCTAAATGAATTTGCTAATTGGTCCAACCCACACCTGAAAATAAAGCTG
CCTCTTTGGAAACACAGGAGTTTAACCTCTCTGAGAGCCAGTTCCCAAGG
CCAGAAGAGTTAGCAGACTTTTCTTTTTTTTTCTGTTGTCATTCCTTTTT
TAAATTCTTAATTCATTTTAATTTTAATTTCACTTATTTATTTTTATGTG
GATGACCTTTTTTACTTACATGTATGTACATGCACCACTTGTTTGCCTGG
TGTTCTCAGAGGTCAAAAGAAGGAAATGTATTCCCAGAAACTAGAGCCAC
CGATGGTGAAAACCCCTGTGTTGGTTCTGGGATAAAAACTANGTCTCTCC
A

GCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCGAAGTCTTTAAGTTCATTTTTAATTTTT
GTTTGACCCAGTTGTCACTGAGTTGAGAGTTGTTCAATTACCATGAGTTT
GTAAGTTTTTTATTGTTTCTATTGTTGTTGAAGTCAAGCTTAAATCCATG
GTGATATGATAAGATGAAAGGGGATATTAGTTTTTTTGTATCTGTTGAGG
CTTGCTTTGTGCCTGAGTATGTGGTCAATTTGGAGAAAGTTCTGTGAGGT
GCTGAGAAGAAGGTATATCTCTTTTTGTGTGGGTTAAATATTCTATAGAC
GGTTGTTGTTGGGGGTTTTGGGGGGGATTTNNNNNNNNNNNNNNNNNNNN
NNNNNNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNN
NNNNTTNNNNNNNNTNNNNNTTTTTTTTTTTTTTTTTNTTTTTTTTTTTT
NTTTTTTTTTTTTTTNTTTTTTTTTTTTT

Query= MSMg01no526_j24.b1 MSMg01no526_j24.b1 CHROMAT_FILE:
MSMg01no526_j24.b1 PHD_FILE: MSMg01no526_j24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:36 2005
         (574 letters)



>mm_chr2_21933720_21934693
          Length = 974

 Score = 1011 bits (523), Expect = 0.0
 Identities = 557/569 (97%), Gaps = 2/569 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctatgtgggatatggttcattactcattcacctccattttctagataaaacagtg 64
           ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 666 gaattctatgtgggagatggttcattacttattcacctccattttctagataaaacagtg 607

                                                                       
Query: 65  aatgtggtaaagttaaaaggttagcccaatatcacacatccataatgagcaggactgaaa 124
           || |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aacgtggtaaagttaagtggttagcccaatatcacacatccataatgagcaggactgaaa 547

                                                                       
Query: 125 tacaaacctacgatagtctctgggtctacattctctgtaaatgcggtacagtgtaccatc 184
           |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 546 tacaaacctacgatagtctctgggtctacattctctgtgaatgcggtatagtgtaccatc 487

                                                                       
Query: 185 tctctaattttatagttccaaagtttctctcctgtataaattattgctaggattctctga 244
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tctctaattttatagtcccaaagtttctctcctgtataaattattgctaggattctctga 427

                                                                       
Query: 245 accctattgttacagcctcaccctagcctgtcaatatagagaagatgcaattatggatag 304
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 426 accctattgttacagcctcaccctagcctgtcaatatagagaagatgctattatggatag 367

                                                                       
Query: 305 tctctaacataccctgtattgtgccttagcattcctgtctgagaaaacttgaggttgcta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tctctaacataccctgtattgtgccttagcattcctgtctgagaaaacttgaggttgcta 307

                                                                       
Query: 365 aatgaatttgctaattggtccaacccacacctgaaaataaagctgcctctttggaaacac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aatgaatttgctaattggtccaacccacacctgaaaataaagctgcctctttggaaacac 247

                                                                       
Query: 425 aggagtttaacctctctgagagccagttcccaaggccagaagagttagcagacttttct- 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 246 aggagtttaacctctctgagagccagttcccaaggccagaagagttagcagacttttctc 187

                                                                       
Query: 484 -ttttttttctgttgtcattccttttttaaattcttaattcattttaattttaatttcac 542
            |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 186 tttttttttctgttgtcattccttttttaaattcttaattcattttaatttcaatttcac 127

                                        
Query: 543 ttatttatttttatgtggatgaccttttt 571
           |||||||||||||||||||||||||||||
Sbjct: 126 ttatttatttttatgtggatgaccttttt 98


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space:   543696
Effective search space used:   543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)