Query= MSMg01no526_n11.b1 MSMg01no526_n11.b1 CHROMAT_FILE:
MSMg01no526_n11.b1 PHD_FILE: MSMg01no526_n11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:53 2005
(640 letters)
>mm_chr2_19649294_19650333
Length = 1040
Score = 1151 bits (595), Expect = 0.0
Identities = 628/643 (97%), Gaps = 8/643 (1%)
Strand = Plus / Plus
Query: 4 ggaattctggaaacttttcaaagaggatgtaaattctagggcctcaaaagatggggttgg 63
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 198 ggaattctggaaacttttcaaagaggatgtaaatgctagggcctcaaaaggtggggttgg 257
Query: 64 cgttgttggtccttcatgggggttgtttgtggtttgttagtcattgttctcaaagaagaa 123
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 258 cgttgttggtccttcatgggggctgtttgtggtttgttagtcattgttctcaaagaagaa 317
Query: 124 acaaaagaaaagaaattaaatttagggatctctctctctctctctctctctctctctct- 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 acaaaagaaaagaaattaaatttagggatctctctctctctctctctctctctctctctc 377
Query: 183 -----tatctaatgatagggaatgaacccaagggtggagaaacaaaggataggaaaaaga 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tctcttatctaatgatagggaatgaacccaagggtggagaaacaaaggataggaaaaaga 437
Query: 238 agatctcataacaaagcgataacacacacaccccaataaatatatacatatacacatata 297
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 438 agatctcatagcaaagcgataacacacacaccccaataactatatacatatacacatata 497
Query: 298 tatgaactcatgagcatacatgagcatgtgaattctttctgaagagtagttttaaggtca 357
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tatgaactcatgaccatacatgagcatgtgaattctttctgaagagtagttttaaggtca 557
Query: 358 caggaaaattgagcagcagagactgagatattacatttctctcatagacctcttaatttc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 caggaaaattgagcagcagagactgagatattacatttctctcatagacctcttaatttc 617
Query: 418 tagtaccctacaccatagggtcacattgttatattagagtttgctttataaatgtgtgtg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tagtaccctacaccatagggtcacattgttatattagagtttgctttataaatgtgtgtg 677
Query: 478 tgtgtaaaggggatatatgcacacatttgtgcacatatacacatttccacacatggaggc 537
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tgt--aaaggggatatatgcacacatttgtgcacatatacacatttccacacatggaggc 735
Query: 538 caaaagatggcattggattctcctgagctgctagtacaggtgtttgcaggtgcctggctt 597
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 736 caaaagatggcattggattcccctgagctgctagtacaggtgtttgcaggtgcctggctt 795
Query: 598 gctacatatgttctgggattcaaactctacttctcatggttgg 640
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 gctacatatgttctgggattcaaactctacttctcatggttgg 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_n11.g1 MSMg01no526_n11.g1 CHROMAT_FILE:
MSMg01no526_n11.g1 PHD_FILE: MSMg01no526_n11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:53 2005
(581 letters)
>mm_chr2_19693779_19694755
Length = 977
Score = 673 bits (348), Expect = 0.0
Identities = 363/370 (98%), Gaps = 4/370 (1%)
Strand = Plus / Minus
Query: 212 ccatgcccagtctcagtctgcctcctgtaatttatggataagatgtgaactctcacctac 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 ccatgcccagtctcagtctgcctcctgtaatttatggataagatgtgaactctcacctac 918
Query: 272 tgcttcatgctgttgccatgcatcatgatgaccatggactaaccctttgaatctggaagc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 tgcttcatgctgttgccatgcatcatgatgaccatggactaaccctttgaatctggaagc 858
Query: 332 aaccttccaattaaatgtttccatttataagttgccttggtcatactggtctatcacaac 391
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 gaccttccaattaaatgtttccatttataagttgccttggtcatactggtctatcacaac 798
Query: 392 aatagaaaagtaactaaaactacattactgaattttccttttgttttgtggctcactgag 451
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 797 aatagaaaagtaactaaaactacattactgaattttccttttgttttgtgg----ctgag 742
Query: 452 ttgaactagggttatctaggtaaccatggatttagaattgtccattgaagcctagtgaac 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttgaactagggttatctaggtaaccatggatttagaattgtccattgaagcctagtgaac 682
Query: 512 gcaccagtagacatgtaactgaatacatttactccccttctctgagaatctacaagtagc 571
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 681 gcaccagtagacatgtaactgaatacatttactccccttctccaagaatctacaagtagc 622
Query: 572 tacttgtaga 581
||||||||||
Sbjct: 621 tacttgtaga 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 977
Length adjustment: 10
Effective length of query: 571
Effective length of database: 967
Effective search space: 552157
Effective search space used: 552157
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
