Query= MSMg01no527_g10.b1 MSMg01no527_g10.b1 CHROMAT_FILE:
MSMg01no527_g10.b1 PHD_FILE: MSMg01no527_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:37 2005
(673 letters)
>mm_chr2_82414314_82415386
Length = 1073
Score = 1189 bits (615), Expect = 0.0
Identities = 621/623 (99%)
Strand = Plus / Minus
Query: 51 acatccagttttctcagcataatttctggtagatgctgtattttatccaatgtatgtgtt 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 acatccagttttctcagcataatttctggtagatgctgtattttatccaatgtatgtgtt 1014
Query: 111 ttgacttttgtcaagtattaaatgactctagttacaggttgtgattatgtcttttatttt 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 ttgacttttgtcaagtattaaatgactctagttacaggttgtgattatgtcttttatttt 954
Query: 171 gttctattgtcaatctgtctgtttttgtaccattaccttattgttttaacactatagctc 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 gttctattgtcaatctgtctgtttttgtaccattaccttattgttttaacactatagctc 894
Query: 231 tataatatatcttgatatctcaatgtatataatgtaagttttaaaaaaatatatattact 290
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 893 tataatatatcttgatatctcaatgtatataatgtaagttttaaaaaaatatgtattact 834
Query: 291 aaatgaatagcccttttagaatcaatacacctcaaatgtgcaagagtcttgcacatgcgt 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 aaatgaatagcccttttagaatcaatacacctcaaatgtgcaagagtcttgcacatgcgt 774
Query: 351 ttgcctgagttattttctattatattcctttttcacatggatgaaatcagatacttttca 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 ttgcctgagttattttctattatattcctttttcacatggatgaaatcagatacttttca 714
Query: 411 gtgctgacttagataatgaaaaaggcagttgggattgattgtgtcagggttacaagttct 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gtgctgacttagataatgaaaaaggcagttgggattgattgtgtcagggttacaagttct 654
Query: 471 agtacataaggtacaagtagcgtgtggttaatgttggtagcaggtggcttattccagttt 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 agtacataaggtacaagtagcgtgtggttaatgttggtagcaggtggcttattccagttt 594
Query: 531 gtatttgggaatagagcaaagcaaatctataaataaaaagcctgaaatgcctagcatgtt 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gtatttgggaatagagcaaagcaaatctataaataaaaagcctgaaatgcctagcatgtt 534
Query: 591 ctagtgttaactcacagaggaaatatctggggaaaaggagacaaaaactttcaggaaact 650
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ctagtgttaactcacggaggaaatatctggggaaaaggagacaaaaactttcaggaaact 474
Query: 651 accttatgtatattttataatat 673
|||||||||||||||||||||||
Sbjct: 473 accttatgtatattttataatat 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_g10.g1 MSMg01no527_g10.g1 CHROMAT_FILE:
MSMg01no527_g10.g1 PHD_FILE: MSMg01no527_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:37 2005
(650 letters)
>mm_chr2_82229811_82230861
Length = 1051
Score = 1164 bits (602), Expect = 0.0
Identities = 641/658 (97%), Gaps = 8/658 (1%)
Strand = Plus / Plus
Query: 1 aaattaaagttcccacattggacagaactagaaatggactgggaggtgacagaaatggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 201 aaattaaagttcccacattggacagaactagaaatggactgggaggtgacagaaacgata 260
Query: 61 tggtcatcacaggaagaataaccaaaa-cctttcaagccaagtttcaacaacagcagctc 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 tggtcatcacaggaagaataaccaaaaacctttcaagccaagtttcaacaacagcagctc 320
Query: 120 agacacattttcataaagaagcttgctataccttcttcataagctctgttgcaaaaaggg 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 agacacattttcataaagaagcttgctataccttcttcataagctctgttgcgaaaaggg 380
Query: 180 tcattttaggcagtagatagatgaattgtctaattgggaaaagacacattgtttgtcctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcattttaggcagtagatagatgaattgtctaattgggaaaagacacattgtttgtcctg 440
Query: 240 taacttgactcttggctttggacagacttttaaacacttaaaaaaaaaaa-------caa 292
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 taacttgactcttggctttggacagacttttaaacacttaaaaaaaaaaaaaaaaaacaa 500
Query: 293 taaacaaactattcaggggcagatccctgtaagtctcatcattcactcagaattcctgac 352
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 taaacaaactattcaggggcagatccctgtaagtctcatcattcactcagaattcctgcc 560
Query: 353 ccagaattgtactgtctaaaagaactacagggacaaaaaatgaggactgaaggaaagcgg 412
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 ccagaattgtactgtctaaaagaactacagggacaaaaaatgaggactgaaggaaagcag 620
Query: 413 aagcaaaacccagcccaacttgggatccatcttgtggaccaaggcttgatgctactatgt 472
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 621 aagcaaaacccagcccaacttgggatccatcttatggaccaaggcttgatactactatgt 680
Query: 473 tctgatgatgtgcttacagacgggaccctactatggctgtcctctgtcaggccctatcgg 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctgatgatgtgcttacagacgggaccctactatggctgtcctctgtcaggccctatcgg 740
Query: 533 aagctgactgagacagaagcagatacttacacccaaccatttgagtgaagtcaaggaacc 592
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 741 aagctgactgagacagaagcagatacttacacccaaccattggagtaaagtcaaggaacc 800
Query: 593 cctatggttgaattagaggaaggattgaagaagctgaaagggagagccaccccataga 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cctatggttgaattagaggaaggattgaagaagctgaaagggagagccaccccataga 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1051
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1041
Effective search space: 666240
Effective search space used: 666240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
