TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTCTGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTT
TCTGGAGTCCACCTTCTTGAGTTCTTTATATATATATATATATTGGATAT
TAGTCCCCTCTCTGATTTAGGATTGGTAAAGATCCTTTCCCAATCTGTTG
GTGGCTTTTTTGTCTTATTGATGGTGTCTTTTGCCTCACAGAAGCTTTGC
AATTTTATGAGGTCCCATTTGTTGATTCTCGATCTTACAGCACTCCAAAT
TTTTTATTAAGTATTTTCTTCATTTACATTTCAAATGCTATCCCGAAAGT
CCCCTATACCCTCCCTGCCCTGCTCCCCTATCCACCCACTCCTACATCTT
GGCCCTAGTGTTCCCCTGTACTAGGGAATATAAAGTTTGCAAACTTTGCT
CATTTTTTAACTCCTGTAAATATTTATTATTGTTGGATGTAAGTACAGTA
GACACGATTTAAAAAATTAANANNATGAAAGNAACCCNNGNNNNCCCCCC
CCAAAATTGGTGCGCCCCCAACCCCCTCCTTNTTTTTTTTTAAANTAAAA
ATAAAAATATTTTTNTTANATTGATAATGATATTTTTTTCTAACTTCTCT
CTTGTTTCTCCTTTTTATTTTCTCTTTTCTTTTTTTTTTTTCTACTTTTT
CTTCCGGTCTTTTTTGCCTCTTTTATTTTTCATCTATTTTTGTTACTATT
TTTTTGCTACAT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGCTTACATTGCTTATTTGCCAATG
GGCTCTGGTTCATTTTATGCTGTTTTAAGGAAAACTCACCTGAAATCATA
AACTTCAGATTTATTTTGTTGGGTTTTCAAATTGAAAGCACTTTCCCAGA
GATAGAATGTAAAGTTGAAAATGACACTGAGAACTGCTTGAGAAATATTT
TGAACTAAATTACATATGTGATTGGAATTAATTAAAGTAGAGAGAAATCA
TATATCCTCTTGTAATAAGCTCAGCTCTTTGCTCAGAAGTTGTACTTGAA
GGATCTCCTATGTACCTCTTCCAGTAGGAGAGTGAAAAACAAAACAAAAA
CAAAACAAAACAAAAAAAAAACAAAAGAAATGATATTGTTTCTCCTGGGT
TGCAAAGTTGATTCAATTAAAACTGGTAGTGCCAAGTTAAGTCATGCACT
GCCTTTCACAAAATTCAATCAAATTTAATGCTAAAGAAGCGCAAGTAAAC
ATGACTGCTTAAATTAAGTGTTTTATCAGTTATAAGTATGATTTTTTATT
CTCTCATTCTCTTTACAATATACAGTATTTGTGGTCTTACAATAAAAGCC
TTACAGTGAATTGCCCAGATATATGGTTTATTAAAGACCATGGTTTACAA
TACTCCACCTCCAAAATTTGTACTGTTAAACAGATACTGGCAACAACATT
ATTAATTCAGAAGTTCAGTCTATGTCAAATTTGAGCATC

Query= MSMg01no527_h16.g1 MSMg01no527_h16.g1 CHROMAT_FILE:
MSMg01no527_h16.g1 PHD_FILE: MSMg01no527_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:44 2005
         (578 letters)



>mm_chr2_108545495_108546472
          Length = 978

 Score =  963 bits (498), Expect = 0.0
 Identities = 510/518 (98%), Gaps = 8/518 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgcttacattgcttatttgccaatgggctctggttcattttatgctgttttaaggaaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgcttacattgcttatttgccaatgggctctggttcattttatgctgttttaaggaaaac 451

                                                                       
Query: 61  tcacctgaaatcataaacttcagatttattttgttgggttttcaaattgaaagcactttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tcacctgaaatcataaacttcagatttattttgttgggttttcaaattgaaagcactttc 391

                                                                       
Query: 121 ccagagatagaatgtaaagttgaaaatgacactgagaactgcttgagaaatattttgaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ccagagatagaatgtaaagttgaaaatgacactgagaactgcttgagaaatattttgaac 331

                                                                       
Query: 181 taaattacatatgtgattggaattaattaaagtagagagaaatcatatatcctcttgtaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 taaattacatatgtgattggaattaattaaagtagagagaaatcatatatcctcttgtaa 271

                                                                       
Query: 241 taagctcagctctttgctcagaagttgtacttgaaggatctcctatgtacctcttccagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 taagctcagctctttgctcagaagttgtacttgaaggatctcctatgtacctcttccagt 211

                                                                       
Query: 301 aggagagtgaaaaacaaaacaaaaacaaaacaaaacaaaaaaaaaacaaaagaaatgata 360
           |||||||||||||||||||||||| |||||       |||||||||||||||||||||||
Sbjct: 210 aggagagtgaaaaacaaaacaaaa-caaaa-------aaaaaaaaacaaaagaaatgata 159

                                                                       
Query: 361 ttgtttctcctgggttgcaaagttgattcaattaaaactggtagtgccaagttaagtcat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ttgtttctcctgggttgcaaagttgattcaattaaaactggtagtgccaagttaagtcat 99

                                                                       
Query: 421 gcactgcctttcacaaaattcaatcaaatttaatgctaaagaagcgcaagtaaacatgac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  gcactgcctttcacaaaattcaatcaaatttaatgctaaagaagcgcaagtaaacatgac 39

                                                 
Query: 481 tgcttaaattaagtgttttatcagttataagtatgatt 518
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 38  tgcttaaattaagtgttttatcagttataagtatgatt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space:   549824
Effective search space used:   549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)