Query= MSMg01no527_i14.b1 MSMg01no527_i14.b1 CHROMAT_FILE:
MSMg01no527_i14.b1 PHD_FILE: MSMg01no527_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:48 2005
(687 letters)
>mm_chr2_61591940_61593027
Length = 1088
Score = 1232 bits (637), Expect = 0.0
Identities = 649/653 (99%), Gaps = 2/653 (0%)
Strand = Plus / Minus
Query: 36 catgacagaaatcataatacccataaaatactaagaaaactgtgaggatgttcagaaagg 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 catgacagaaatcataatacccataaaatactaagaaaactgtgaggatgttcagaaagg 1029
Query: 96 acccaagatacaatacagctctttaaatacctgggnggaaaaatacagaatacaggagtt 155
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1028 acccaagatacaatacagctctttaaatacctggg-ggaaaaatacagaatacaggagtt 970
Query: 156 ggttggagtgtgttctcaaagtacaaactctgaatcagttatatttctatcatttggaaa 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 ggttggagtgtgttctcaaagtacaaactctgaatcagttatatttctatcatttggaaa 910
Query: 216 cttgtgagtaatatacatttttactgaatcaacagaaatcagggttctaaaaaggttctc 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 cttgtgagtaatatacatttttactgaatcaacagaaatcagggttctaaaaaggttctc 850
Query: 276 cagcaactctgagtcctgatgaaacttcaagatcgttgatttcagactacattacaacta 335
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 849 cagcaactctgagtcctgatgaaacttcaagatcgttgatttcagactacattagaacta 790
Query: 336 taagccaatgggaaagttatccaagctt-cagactgggaaaaatcttgtaatagcccaag 394
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 789 taagccaatgggaaagttatccaagcttacagactgggaaaaatcttgtaatagcccaag 730
Query: 395 atacacaagaaagaaattaaatagattccctgtaactagagttactcaacagactgctca 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 atacacaagaaagaaattaaatagattccctgtaactagagttactcaacagactgctca 670
Query: 455 ggctagacatctgagagctgattagctcaaacaacacagtaagtcccaactccatcatca 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ggctagacatctgagagctgattagctcaaacaacacagtaagtcccaactccatcatca 610
Query: 515 cattatttccaagtaagccagtcccaactcagtgccttcagacaccaaagttaatatatt 574
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 609 cattatttccaagtaagccagtcccaactcagtgccttcagacaccaaagttaacatatt 550
Query: 575 ctctataagttaatcttttcaacttattttaatgtcttaagtctcatactacattaatac 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ctctataagttaatcttttcaacttattttaatgtcttaagtctcatactacattaatac 490
Query: 635 ctaggtagagtttctgctgactcaattcagttcttatacccaacataaagcca 687
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctaggtagagtttctgctgactcaattcagttcttatacccaacataaagcca 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1088
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1078
Effective search space: 729806
Effective search space used: 729806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_i14.g1 MSMg01no527_i14.g1 CHROMAT_FILE:
MSMg01no527_i14.g1 PHD_FILE: MSMg01no527_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:48 2005
(642 letters)
>mm_chr2_61452299_61453340
Length = 1042
Score = 1210 bits (626), Expect = 0.0
Identities = 638/642 (99%)
Strand = Plus / Plus
Query: 1 cactaaagagtcacagttatttgggttttgttgttatttttgaattcagagttgtcctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactaaagagtcacagttatttgggttttgttgttatttttgaattcagagttgtcctta 260
Query: 61 tagatactgtgtcaaccaaaagtccaaactcaggacaagtagatccactgtaagtgttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagatactgtgtcaaccaaaagtccaaactcaggacaagtagatccactgtaagtgttac 320
Query: 121 tatactgtctaaataagctgagacagcagtcacagtcttactacataggaatggtgtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatactgtctaaataagctgagacagcagtcacagtcttactacataggaatggtgtgaa 380
Query: 181 aggccattttcccaagtaatatcaaaggaccgattttgcaagtaagcctttatgaaaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggccattttcccaagtaatatcaaaggaccgattttgcaagtaagcctttatgaaaata 440
Query: 241 acagtcacagatctactaggaggaataatagcttattcctccactgacagttggagatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagtcacagatctactaggaggaataatagcttattcctccactgacagttggagatag 500
Query: 301 gggaccttacattgttttctttgattaaaaattttcttgaggagctagagagatagctcg 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaaccttacattgttttctttgattaaaaattttcttgaggagctagagagatagctcg 560
Query: 361 gtggtttaaagtgcttgccgttaaagcatgaggaccagatttgattccccagaacccatg 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtggtttaaagtgcttgccattaaagcatgaggaccagatttgattccccagaacccatg 620
Query: 421 tacatgttgggtgagcatgttgatctgcctgtaattccagcatttgataggcagagatag 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 tacatgttgggtgagcatgttgatctgcctgtaattccagcatttgataggcagagttag 680
Query: 481 gaactccttagaacaagccacataatcatactagccacattggcagcagcctctaaggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaactccttagaacaagccacataatcatactagccacattggcagcagcctctaaggct 740
Query: 541 caattgagagaaggaataaactggagagtgattgaagaaaccctcagcatcagcctctag 600
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caattgagagaatgaataaactggagagtgattgaagaaaccctcagcatcagcctctag 800
Query: 601 aggcacacacatgcacatgtgcccacaaacatgaacatacat 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aggcacacacatgcacatgtgcccacaaacatgaacatacat 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
