Query= MSMg01no528_c06.b1 MSMg01no528_c06.b1 CHROMAT_FILE:
MSMg01no528_c06.b1 PHD_FILE: MSMg01no528_c06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:39 2005
(693 letters)
>mm_chr2_55115428_55116518
Length = 1091
Score = 1251 bits (647), Expect = 0.0
Identities = 680/691 (98%), Gaps = 4/691 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaggtaggtagctagcaaagatttggctgtatttatatattaagttgcttcatc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 ggaattcaggtaggtagctagcaaagatttggctgtatttatatattaagttgcttcatc 832
Query: 64 tcttacttgtggagctgaatttacagtatctaagagcttctgtagaatgctgttactgtt 123
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 831 tcttacttgtggagctgaatttacagtgtctaagagcgtctgtagaatgctgttactgtt 772
Query: 124 gaagttttttcaagactaaatggcaggacttggtctatggtatataacttctcattttct 183
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 771 gaagttttttcaagactaaatggcaggacttgctctatggtatataacttctcattttct 712
Query: 184 tctttactctttctattttgggggagggggtattataatactagagaataacaattcatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tctttactctttctattttgggggagggggtattataatactagagaataacaattcatt 652
Query: 244 taacttgaaactaaactaacataaaaagaaggcctcaaaagcccaaataatttgaattcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 taacttgaaactaaactaacataaaaagaaggcctcaaaagcccaaataatttgaattcc 592
Query: 304 aaacacacagatgacctttctgtatcacaagcttcatgtcttcaaacgctcatgaaacat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aaacacacagatgacctttctgtatcacaagcttcatgtcttcaaacgctcatgaaacat 532
Query: 364 ctga-acactataagtttaatgacttcctaaagtggcaagcacaatgaatgtttaaagcc 422
|| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ct-ata-agtataagtttaatgacttcctaaagtggcaagcacaatgaatgtttaaagcc 474
Query: 423 agaagggttttgtgctccttttgtaaatttgcagtatgtgttcaatggagatcagtatag 482
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 agaagggttttgtgctttttttgtaaatttgcagtatgtgttcaatggagatcagtatag 414
Query: 483 tgaggacctctgctttataaaatgtgaaaggctactgagaaatttgataagggattttca 542
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 413 tgaggacctctgctttataaaatgtgaaaggctactgagaaatttgataaggga-tttca 355
Query: 543 ttcaaaataacttgctaattttattgttctcattgtctttgtagccatgtctcactctgt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ttcaaaataacttgctaattttattgttctcattgtctttgtagccatgtctcactctgt 295
Query: 603 accccaaatgcagtcaacacaaccttcacaatcatagaaatcctcttgttttaccctccc 662
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 accccaaatgcagtcaacataaccttcacaatcatagaaatcctcttgttttaccctccc 235
Query: 663 acacaccaaattacttgctttagatttgctt 693
|||||||||||||||||||||||||||||||
Sbjct: 234 acacaccaaattacttgctttagatttgctt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1091
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1081
Effective search space: 738323
Effective search space used: 738323
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_c06.g1 MSMg01no528_c06.g1 CHROMAT_FILE:
MSMg01no528_c06.g1 PHD_FILE: MSMg01no528_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:40 2005
(613 letters)
>mm_chr2_55030886_55031898
Length = 1013
Score = 1116 bits (577), Expect = 0.0
Identities = 604/613 (98%), Gaps = 2/613 (0%)
Strand = Plus / Plus
Query: 1 acctgtctgtcaggagaaagctgaatctacagcaaggaccttgggaagtgatgtaaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctgtctgtcaggagaaagctgaatctacagcaaggaccttgggaagtgatgtaaagac 260
Query: 61 caacagaactgtggtacttataagtcatcctgaaggtgtgcatttagcaggatgtggcac 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcagaactgtggtacttataagtcatcctgaaggtgtgcatttagcaggatgtggcac 320
Query: 121 aatacagtaatgttaattactgaaccttacttctgtgagaaggcttgctcatagctttag 180
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 aatacagtaatgttaattactgaaccttacttctgtgagaaggcttgctcttagctttaa 380
Query: 181 tccagagctacacattaaaatttagctgaaactttacagaccgaaacaagaggccatgaa 240
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 ttcagagctacacattaaaatttagctgaaactttacagaccaaaacaagaggccatgaa 440
Query: 241 tttgaaaaggagtatgagagtgtatgggagtgtttagagggaagaaaagaaatggagaaa 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 tttgaaaaggagtatgagagtgtatgggagtgtttagagggaagaaaa-aaatggagaaa 499
Query: 301 taatgacattttattatagccttaagggatatgtctttaagttaaaggaatgtcttagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taatgacattttattatagccttaagggatatgtctttaagttaaaggaatgtcttagtc 559
Query: 361 attgttctattgatatgaagagagactatgaccctgaaaactcttatataggaaagcatt 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 attgttctattgataggaagagagactatgaccctgaaaactcttatataggaaagcatt 619
Query: 421 tcattggggcttacttatagtttcagaggtttagtccattatcatggccgaaagcatggt 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 620 tcattggggcttacttatagtttcagaggtttagtccattttcatggccgaaagcatggt 679
Query: 481 ggcacacaggcagaaatggtgctggagaaggagcccttagttttacacccagatctgcag 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 680 ggcacacaggcagaaatggtgctg-agaaggagcccttagttttacacccagatctgcag 738
Query: 541 gcagcagggcagagaaaaagagaaccagctagcttgggtttctgaaacaccaaagaacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gcagcagggcagagaaaaagagaaccagctagcttgggtttctgaaacaccaaagaacat 798
Query: 601 accagtgatacaa 613
|||||||||||||
Sbjct: 799 accagtgatacaa 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
