Query= MSMg01no528_k01.b1 MSMg01no528_k01.b1 CHROMAT_FILE:
MSMg01no528_k01.b1 PHD_FILE: MSMg01no528_k01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:17 2005
(650 letters)
>mm_chr2_130506162_130507212
Length = 1051
Score = 1129 bits (584), Expect = 0.0
Identities = 632/650 (97%), Gaps = 5/650 (0%)
Strand = Plus / Minus
Query: 4 ggaattcactatgtaaaccaggctggccctgagctcacaaagatctgtttgcctctgcct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 ggaattcactatgtaaaccaggctggccctgagctcacaaagatctgtttgcctctgcct 892
Query: 64 cccaaattctgggattaaaagtgtgcactaccatgcctggtcaaaggaaactcttgaatc 123
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 891 cccaaattctgggattaaaagtgtgcgctaccatgcctggtcaaaggaaactcttgaatc 832
Query: 124 caaggggcaagagtttagtatcaactggcccagagttcccctatgcagagccaactgctc 183
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 831 caagggacaagagtttagtatcaactggctcagagttcccctatgcagagccaactgctc 772
Query: 184 ttccaagaactggctcctgatgctgcctggatctcctggcagaagggaacccagagaaag 243
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 771 ttccaagaactggctcctgatgctgcctggatctcctggcagaggggaacccagagaaag 712
Query: 244 cctcacaggagtgcctgcctcctggggagttctgcactagtccctacccatggtgctagt 303
||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||
Sbjct: 711 cctcacaggagtgcctgcctcctagggagttctgcactagcccctacccatggcgctagt 652
Query: 304 ggtcaccagccccagcagccacactaaagtactcctgtagcttgtgcagggcccggaacc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ggtcaccagccccagcagccacactaaagtactcctgtagcttgtgcagggcccggaacc 592
Query: 364 gatgagaaatggtgttcttctcagactttggcatctctgcatacctaacaggaaagagaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gatgagaaatggtgttcttctcagactttggcatctctgcatacctaacaggaaagagaa 532
Query: 424 gcagctcagaaaacagggaacccaggtactgggggacaggcacccaactgtctccctgga 483
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 531 gcagctcagaaaacagggaacccaggtattgggggacaggcacccaactgtctccctgga 472
Query: 484 gcacaaaccttttttttt---aatccaaatttttttttcatttatccttctgtcatatat 540
|||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 471 acacaaatcttttttttttttaatccaaattttttt--catttatccttctgtcatatat 414
Query: 541 tacatcccaagttttccctccctcctctcctcccagtccctcatctacccacaaatccac 600
|||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||
Sbjct: 413 tacatcccaagttttccctctctcctctcctcccagtccctcatccacccccaaatccac 354
Query: 601 tcttccttcaggcctcccagggatattacccaaacatggtatatcatgtt 650
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tcttccttcaggcctcccagggatattacccaaacatggtatatcatgtt 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1051
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1041
Effective search space: 666240
Effective search space used: 666240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_k01.g1 MSMg01no528_k01.g1 CHROMAT_FILE:
MSMg01no528_k01.g1 PHD_FILE: MSMg01no528_k01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:17 2005
(397 letters)
>mm_chr2_130374060_130374855
Length = 796
Score = 752 bits (389), Expect = 0.0
Identities = 395/397 (99%), Gaps = 1/397 (0%)
Strand = Plus / Plus
Query: 1 ctaagtgagcgtaaccccagacatcagtgtcacaactgtaaggatctatatagtgtctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaagtgagcgtaaccccagacatcagtgtcacaactgtaaggatctatatagtgtctct 260
Query: 61 tcatacatttcattaaatcccagttctgtcacatggccgaatgtatttcatgcctcacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatacatttcattaaatcccagttctgtcacatggccgaatgtatttcatgcctcacac 320
Query: 121 accttacactcctccctgcgctagctttttcaccttcaaactcatcatatagcattagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accttacactcctccctgcgctagctttttcaccttcaaactcatcatatagcattagtc 380
Query: 181 tacagcccgggttcagtcgggaccaaataaaactaccttaacccactgttcccatcagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacagcccgggttcagtcgggaccaaataaaactaccttaacccactgttcccatcagcc 440
Query: 241 agccaaaagggctacatcctccttccccagcccagcttggagggccgtctttatcttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agccaaaagggctacatcctccttccccagcccagcttggagggccgtctttatcttctg 500
Query: 301 cctcctcccctgtgagtaactgattttatgacctaaagctgctaggtgtgatcttaagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 cctcctcccctgtgagtaactgattttatgacctaaagctgctaggtgtgatcttcagta 560
Query: 361 cctatttattagtttgatgggtgggtngggtgggggt 397
|||||||||||||||||||||||||| ||||||||||
Sbjct: 561 cctatttattagtttgatgggtgggt-gggtgggggt 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 796
Length adjustment: 9
Effective length of query: 388
Effective length of database: 787
Effective search space: 305356
Effective search space used: 305356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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