Query= MSMg01no528_o08.b1 MSMg01no528_o08.b1 CHROMAT_FILE:
MSMg01no528_o08.b1 PHD_FILE: MSMg01no528_o08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:38 2005
(657 letters)
>mm_chr2_66435999_66437055
Length = 1057
Score = 1143 bits (591), Expect = 0.0
Identities = 636/653 (97%), Gaps = 4/653 (0%)
Strand = Plus / Minus
Query: 5 gaattcttatgcattggagctcaataggtaaagtgtttgcaagcacaagaacctgagtta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gaattcttatgcattggagctcaataggtaaagtgtttgcaagcacaagaacctgagtta 767
Query: 65 gatcctctagcaattacattgttaaaagttaggtatggtagtttgtgcttgaagtctcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 766 gatcctctagcaattacattgttaaaagttaggtatggtagtttgtgcttgcagtctcaa 707
Query: 125 agcaagaaggcagaaacaggaggaaccgtgagactgggttgtctgggcttataaattgac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 agcaagaaggcagaaacaggaggaaccgtgagactgggttgtctgggcttataaattgac 647
Query: 185 ttctttccaagaaaccatccaggcagccaaaccccttgcacattgtcttgggctgtagat 244
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 646 ttctttccaagaaaccatccaggcagccaaaccccttgcacagtgtcttgggatgtagat 587
Query: 245 gtagaattccttagcatcccaagaagtcatccaggcagcaaaccatagccccagggacat 304
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 586 gtagaattccttagcatcccaagaagtcatccagacagcaaaacatagccccagggacat 527
Query: 305 ggattatactttcagagtatctgagagtctacaccacagtgaaagtttactcaactgatg 364
| | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 526 gaactatactttcagagcatctgagagtctacaccacagtgaaagcttactcaactgatg 467
Query: 365 cagagccaatgcttgaacatctgagagcccaactgtactctacacccctgcccccagaca 424
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 466 cagagccaatgcttgaacatctgagagcccaactgtactctacacccccgcccccagaca 407
Query: 425 ggagaacacccaggaacaccatatatagatcattttatttcacacaggttacctaacttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 406 ggagaacacccaggaacaccatatatagatcattttatttcacacaggttatctaacttt 347
Query: 485 attttgatttattatgttaagatgtcttcttgttgtcgtttgtattttgatgtgtgtggt 544
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 346 attttgatttattatgttaagatgtcttgttgttgtcatttgtattttgatgtgtgtggt 287
Query: 545 gctcaagataaaacccatggccttgtgtgtgtgtgttaggcaagtattctgctactgagc 604
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 286 gctcaagataaaacccatggcct----tgtgtgtgttaggcaagtattctgctactgagc 231
Query: 605 tgtctccagcctattaaaagtgatttttacactaataattaactttcttcttt 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tgtctccagcctattaaaagtgatttttacactaataattaactttcttcttt 178
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_o08.g1 MSMg01no528_o08.g1 CHROMAT_FILE:
MSMg01no528_o08.g1 PHD_FILE: MSMg01no528_o08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:38 2005
(616 letters)
>mm_chr2_66275888_66276903
Length = 1016
Score = 1160 bits (600), Expect = 0.0
Identities = 612/616 (99%)
Strand = Plus / Plus
Query: 1 ctgaccccaaaccccaaaaatactagctggttttgtatgtcaacttgacacagctggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgaccccaaaccccaaaaatactagctggttttgtatgtcaacttgacacagctggagt 260
Query: 61 tatcacagagaaagaagcgtcccttgaggaaatgcctccatgagatctagccgtaaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatcacagagaaagaagcgtcccttgaggaaatgcctccatgagatctagccgtaaggca 320
Query: 121 tttctcaatgtgggtggtgccatgcctggactggtagtcctgggttctataagaaagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctcaatgtgggtggtgccatgcctggactggtagtcctgggttctataagaaagcaa 380
Query: 181 gctgagcaagccacacaaagcaatccagtaaggagcactcctccatggcctctgcatcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgagcaagccacacaaagcaatccagtaaggagcactcctccatggcctctgcatcag 440
Query: 241 ctcctgcctctaagttcctgtcctgtgtgagttcctgttccagcttcctttggtgatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcctgcctctaagttcctgtcctgtgtgagttcctgttccagcttcctttggtgatgaa 500
Query: 301 cagcaatgtggacgtgttagctgaataaaccctttcctccctaacttgcttcttgatcat 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagcaatgtggacgtgttagctcaataaaccctttcctccctaacttgcttcttgatcat 560
Query: 361 gttttgtgcaggaacacaaagcctgactaagacacccaattaggctcagccgcaatcttg 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 gttttgtgcaggaacacaaagcctgactaagacacccaattaggcccagccgcaatcttg 620
Query: 421 tgttagaacaatcacttactttacagagagaaactgagcaccaaaggggccagtgatatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgttagaacaatcacttactttacagagagaaactgagcaccaaaggggccagtgatatg 680
Query: 481 tgcaaagtcgcactgagcatataagagaggtaggtcctctagtgtatttacatcgtgcca 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcaaagtcgctctgagcatataagagaggtaggtcctctagtgtatttacatcgtgcca 740
Query: 541 tttagctccaaagagctagtattccacatggaactgctgaaaaaccaatattgctgggaa 600
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttagcttcaaagagctagtattccacatggaactgctgaaaaaccaatattgctgggaa 800
Query: 601 ccccttgcacttcaga 616
||||||||||||||||
Sbjct: 801 ccccttgcacttcaga 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
