ACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTACCAGATTTGCAATTTGTAAAAAGAAATGAAATGCTGTGGGT
TGTAGAGATGATTAAGTAAGTGGCTAAGAATGATCGCTGCTTTTCTAGAA
GATCCAACTTCAGTCCCAGCACCCATAGCAGGTAACTTACACTGCCTGCA
ACTCTAGCTCCAGGGGACTTGACACCCTCTTCTGGTCTTTGTAAGCCTTC
TCCCACTTGAGGCACACACATACACATACACACACACACACACACACACA
CACACACACACACACACACACACACACACACAGAGGAATCTTTAAAACTG
TTTTCATTTTGTGTTTGAGTGTTTTCCCTGCATGTTTATCTAAATGAATA
TACTATGTGCATGCCTGGTGCCCACAGGTCAGAAGAGAGTGTCACATCCC
TTGGAACTAGGCTGTACATGGTTGTGAGCCATATTGCCAGTACTAGGAAT
TGAACCCAGGTCCTCTGGAAGAGCAGCCAAATGCTCTGAGCCATTCATTT
ATCTCTCCCACACTGCACTGTGTGCTTTAAGACATCTTTTGTTAGTTTCT
CACAGTGACCATCGGGGAGGTTTCTGTTTCATTCTCTATTCTGGAAGAGG
GCTCAGAGACAGGTCCAAGGTTCCCCATTCCAGAGGCAGGGCTGTGTTCC
ACACTGAGGTCTGGAGACATCCTTGTCCAGTCTCTCAAAATCACGAATGC
ATGGGATACAGCN

NCCATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGTGAAAATATAACAGTTGGCAAGGAC
TTGAAGGCAGTGAGGCGGATTGTCCCTGGCAAGCAGGAGCTCATGTGCTA
CAAACCGGGGCAGGAACCTCCCTGACATGTTCCGGGAACTTCAGAAACAC
CACTAAGGCTGCAACAGGAAAGCTTAAGGGGAAAATATTCAAGCACAAAG
GTGTCAGAAGAGAATTGAGAACAGAAGGTATGAGGAATATCCGGGTCCCT
CTGTCACAGGAGGCATGAATACGAGGCAGATAATCAGTGCTACTGAGAGC
ACGTGGTCACTGCGTGGCCTCAGTTTCCTCTCCTGTAAAATGCTTTAGAC
CGTTTCTGGGAGATGGAGATGATGGGGTGTGTGATGGTCCTGACAACTGG
GAGACTATCTTCAGCATACAGAAGCTGTGTTCAAGAAGTCAACGTGAAGT
GGCATAGACAAATTTGAATGCTTAAAGCGTCTAAGGCACAGCGGGTTGCT
GGGGGGACTTCAGAATTGAGCATGCATTTATGGACGCTCTTAGTGAAGCT
CTTGGTCTCCCACCCTCTGGGTTTTGTTTACATAGACATGAGTTTTATTT
ACTGCTTGAATGACATCAGTTGGGCTGAGCTGGTAGAGGCGAAGGTCTGT
AATGTCAAGGGTGGTGAAGTCTGGACATCCGTATGACTTTGGGCCAGCAA
CCTCATCTCCTG

Query= MSMg01no529_d15.g1 MSMg01no529_d15.g1 CHROMAT_FILE:
MSMg01no529_d15.g1 PHD_FILE: MSMg01no529_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:06 2005
         (670 letters)



>mm_chr2_170219587_170220656
          Length = 1070

 Score = 1106 bits (572), Expect = 0.0
 Identities = 635/656 (96%), Gaps = 1/656 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtgaaaatataacagttggcaaggacttgaaggcagtgaggcggattgtccctggcaag 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 agtgaaaatgtaacagttggcaaggacttgaaggcagtgaggcggattgtccctggcaag 596

                                                                       
Query: 61  caggagctcatgtgctacaaaccggggcaggaacctccctgacatgttccgggaacttca 120
           ||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 595 cagaagctcgtgtgctacaaactggggcaggaacctccctgacatgttccgggaacttca 536

                                                                       
Query: 121 gaaacaccactaaggctgcaacaggaaagcttaaggggaaaatattcaagcacaaaggtg 180
           |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 535 gaaacaccactaaggctgtaaccggaaagcttaaggggaaaatattcaagcacaaaggtg 476

                                                                       
Query: 181 tcagaagagaattgagaacagaaggtatgaggaatatccgggtccctctgtcacaggagg 240
           ||||||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 475 tcagaagagaaatgagaacagaaggtgtgagggatattcgggtccctctgtcacaggagg 416

                                                                       
Query: 241 catgaatacgaggcagataatcagtgctactgagagcacgtggtcactgcgtggcctcag 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 catgaatatgaggcagataatcagtgctactgagagcacgtggtcactgcgtggcctcag 356

                                                                       
Query: 301 tttcctctcctgtaaaatgctttagaccgtttctgggagatggagatgatggggtgtgtg 360
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 355 tttcctctcctgtaaaatgccttagaccgtttctgggagatggagatgatggggtttgtg 296

                                                                       
Query: 361 atggtcctgacaactgggagactatcttcagcatacagaagctgtgttcaagaagtcaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 295 atggtcctgacaactgggagactatcttcagcatacagaagctgtgttcaagaagtcaat 236

                                                                       
Query: 421 gtgaagtggcatagacaaatttgaatgcttaaagcgtctaaggcacagcgggttgctggg 480
           |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 235 gtgatgtggcatagacaaatttgaatgcttaaagtgtctaaggcacagcgggttgctggg 176

                                                                       
Query: 481 gggacttcagaattgagcatgcatttatggacgctcttagtgaagctcttggtctcccac 540
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gg-acttcagaattgagcatgcatttatggacgctcttagtgaagctcttggtctcccac 117

                                                                       
Query: 541 cctctgggttttgtttacatagacatgagttttatttactgcttgaatgacatcagttgg 600
           ||||||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||
Sbjct: 116 cctctgggttttgtttaccgagacatgagttttgtttactgcttgagtgacatcagttgg 57

                                                                   
Query: 601 gctgagctggtagaggcgaaggtctgtaatgtcaagggtggtgaagtctggacatc 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56  gctgagctggtagaggcgaaggtctgtaatgtcaagggtggtgaagtctggacatc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space:   699600
Effective search space used:   699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)