Query= MSMg01no529_e17.b1 MSMg01no529_e17.b1 CHROMAT_FILE:
MSMg01no529_e17.b1 PHD_FILE: MSMg01no529_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:11 2005
(681 letters)
>mm_chr2_137353711_137354791
Length = 1081
Score = 1197 bits (619), Expect = 0.0
Identities = 672/707 (95%), Gaps = 31/707 (4%)
Strand = Plus / Plus
Query: 5 gaattctttacaa-ctacatttctcttgaaaaaaaaa-tcttggt--------------- 47
||||||||||||| ||| ||||||||||||||||||| |||||||
Sbjct: 176 gaattctttacaaactaaatttctcttgaaaaaaaaaatcttggttctttcttaagaacg 235
Query: 48 ------------gtagaatataggttaggtcctaagtgtttgctgtctgagaacagtgga 95
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ttccccagctgtgtagaatataggttaggtcctaagtgtttgctgtctgagaacagtgga 295
Query: 96 agcacccactgcctcccacattgtacaccccttcacagagggaatcactcagcatgtatt 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agcacccactgcctcccacattgtacaccccttcacagagggaatcactcagcatgtatt 355
Query: 156 acattatcatataattttcctcctcctttcatctttttatggtgagtggcttcctctcct 215
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 356 acattatcatataattttcctactcctttcatctttttatggtgagtggcttcctctcct 415
Query: 216 ctatatactaatatcacatctcttgataacgacagacatcactagccttttccctgtggt 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ctatatactaatatcacatctcttgataacgacagacatcactagccttttccctgtggt 475
Query: 276 ttagggcatgcctctactggtttagtagtatgatgctagcttctggacctaaagaatttt 335
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 476 ttagggcatgcctctactggtttagtagtatgatgctagcttctggacctaaggaatttt 535
Query: 336 ctttctcaggtctagaggacatctttccattgtgaggctgcacagcgtgttttttgggat 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ctttctcaggtctagaggacatctttccattgtgaggctgcacagcgtgttttttgggat 595
Query: 396 aatgtgattctgtcaatgttctttattccactctagtcccattctctttctcacaatgac 455
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aatgtgattctgtcaatgttcgttattccactctagtcccattctctttctcacaatgac 655
Query: 456 ttccttatgttactttctgtctttttagaataaaaggtgatatccatgtttgcttcgtat 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ttccttatgttactttctgtctttttagaataaaaggtgatatccatgtttgcttcgtat 715
Query: 516 ctttagcaaggacttctttgcctttctgatgaggtgaaacccagttatacatgtttataa 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ctttagcaaggacttctttgcctttctgatgaggtgaaacccagttatacatgtttataa 775
Query: 576 tgtaattgcaatcactgtagatccaaatagtgggttgtgatcacaagggtcttaagctca 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tgtaattgcaatcactgtagatccaaatagtgggttgtgatcacaagggtcttaagctca 835
Query: 636 ttcagaactgctctttgaagaatatgtttagtaanca-gagcacata 681
|||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 836 ttcagaactgctctttgaagaatatgtttagtaa-caagagcacata 881
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_e17.g1 MSMg01no529_e17.g1 CHROMAT_FILE:
MSMg01no529_e17.g1 PHD_FILE: MSMg01no529_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:12 2005
(668 letters)
>mm_chr2_137509953_137511021
Length = 1069
Score = 980 bits (507), Expect = 0.0
Identities = 534/543 (98%), Gaps = 1/543 (0%)
Strand = Plus / Minus
Query: 127 tagaaaattcttaaggtagctattgtatatacttgaaaagtctctcccaaattacatttg 186
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 791 tagaaaattcttaaggtagctattgtatacacttgaaaagtctctcccaaattacatttg 732
Query: 187 agcaggtgccattttaagaaggtaaagggcaatatttattaatatatggtaatcaaaata 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 agcaggtgccattttaagaaggtaaagggcaatatttattaatatatggtaatcaaaata 672
Query: 247 tttgttgaagcatgtttgaaatgtcatcaggtatcctgctgctgccccacccccacacac 306
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 671 tttgttgaagcatgtttgaaatgccatcaggtgtcctgctgctgccccacccccacacac 612
Query: 307 cccaattcatgtgaaagaaggttaag-aaagtcgttatctgacaaaccagttttcttcta 365
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 611 cccaattcatgtgaaagaaggttaagcaaagtcgttatctgacaaaccagttttcttcta 552
Query: 366 gatgaggaaatcaatcagaactaccttcaatacaatattctctatacatatggcgctgcc 425
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gatggggaaatcaatcagaactaccttcaatacaatattctctatacatatggcgctgcc 492
Query: 426 atcctgtaggtcatccaaccacctgtaaacattttcacctcctgcagcagtgtggagtct 485
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 491 atcctgtaggtcatccaactacctgtaaacactttcacctcctgcagcagtgtggagtct 432
Query: 486 gctggcctgaagacagttttgtaagaaataatcacaaagaagttgttggatttttgcttg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gctggcctgaagacagttttgtaagaaataatcacaaagaagttgttggatttttgcttg 372
Query: 546 agtacataacaacaaaggtaatctctggcatgaattgagcaatctcaactcctccacttt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agtacataacaacaaaggtaatctctggcatgaattgagcaatctcaactcctccacttt 312
Query: 606 tacccgggactttccaggtttgagtactgaaaagtcctgcatcctgagaatccccatagt 665
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 311 tacccgggactttccaggtttgagcactgaaaagtcctgcatcctgggaatccccatagt 252
Query: 666 cta 668
|||
Sbjct: 251 cta 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1069
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1059
Effective search space: 696822
Effective search space used: 696822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
