Query= MSMg01no530_m04.b1 MSMg01no530_m04.b1 CHROMAT_FILE:
MSMg01no530_m04.b1 PHD_FILE: MSMg01no530_m04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:11 2005
(684 letters)
>mm_chr2_133572328_133573411
Length = 1084
Score = 814 bits (421), Expect = 0.0
Identities = 430/433 (99%)
Strand = Plus / Minus
Query: 252 acaaaaagctggatgtgggtccatgtgccttcaaccaccatgctatgggaaatttgaggc 311
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 acaaaaagctggatgtaggtccatgtgccttcaaccaccatgctatgggaaatttgaggc 1025
Query: 312 aggaggaatactggagtttgcttgctagcagcttagttccaaactcagtgagtaacattg 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 aggaggaatactggagtttgcttgctagcagcttagttccaaactcagtgagtaacattg 965
Query: 372 tctcaaatttataaggtatatattgataaaccaggatataagaccttctctgctggtgtt 431
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 964 tctcaaatttataaggtatagattgataaaccaggatataagaccttctctgctggtgtt 905
Query: 432 cttgtgcatgtacacacacatttaacacagatgcacacaaataaacgtgtcccacacctc 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 cttgtgcatgtacacacacatttaacacagatgcacacaaataaacgtgtcccacacctc 845
Query: 492 caccacacacaacaattggctaaaaagaatattagtactccctcctttgcttccagagtc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 caccacacacaacaattggctaaaaagaatattagtactccctcctttgcttccagagtc 785
Query: 552 tggaagattttctgtcatatcaacctccttgttggagtcttcaaaatattcaagatctga 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 tggaagattttctgtcatatcaacctccttgttggagtcttcaaaatattcaagatctga 725
Query: 612 aaattaagagtagttcagcctacttgcttgctgccttcttttgcaagcttccatggcaaa 671
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 724 aaattaagagtagttcagcctacttgcttgctgccctcttttgcaagcttccatggcaaa 665
Query: 672 ttgtggtactatg 684
|||||||||||||
Sbjct: 664 ttgtggtactatg 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space: 723876
Effective search space used: 723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_m04.g1 MSMg01no530_m04.g1 CHROMAT_FILE:
MSMg01no530_m04.g1 PHD_FILE: MSMg01no530_m04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:11 2005
(637 letters)
>mm_chr2_133405371_133406407
Length = 1037
Score = 1036 bits (536), Expect = 0.0
Identities = 612/638 (95%), Gaps = 2/638 (0%)
Strand = Plus / Plus
Query: 1 ctggtatatgctgggcttgagttcttttaaagaatacagaggatggcagaaggtatttgg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ctggtatatgctgggcttgagttcttttaaagaatacagaggatggccgaaggtatttgg 260
Query: 61 cttagcaggatgaagaagagctctttattcgggatgagtcagagttccagccatccagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttagcaggatgaagaagagctctttattcgggatgagtcagagttccagccatccagga 320
Query: 121 ctcacctgggaatttgaagttccaccccagctaccaactggccagggctttactccagag 180
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 321 ctcacctgggaatttgaagttccaccccagctaccaattggccaggactttactccagag 380
Query: 181 cctctgtctttgaggctgtactggctagttttatgtcaacttgacacagctggagttatc 240
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 cctctgtctttgaggccgtactggctagttttatgtcaacctgacacagctggagttatc 440
Query: 241 acagagaaaggagtttcagttggggaaatgcctccattagatccaactgtaaggcatttt 300
|||||||||||||||||||||| |||||||||||||| ||||||| |||| ||||||||
Sbjct: 441 acagagaaaggagtttcagttgaggaaatgcctccatgagatccagctgtggggcatttt 500
Query: 301 ctcaattagtgatcaagggggaagggccccttgtggatgggaccatctctgggctgggag 360
|||| |||||||||||||||||| ||||||| |||| |||||||||||||||||||||||
Sbjct: 501 ctcagttagtgatcaagggggaaaggcccctcgtgggtgggaccatctctgggctgggag 560
Query: 361 tcttgg--tctccaagaaagcaggctgagcaaaccaggggaagcaagccagtaaagaaca 418
|||||| |||| |||| |||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 561 tcttgggttctctaagagagcaggctgagcaagccaggggaagcaagtcagtaaagaaca 620
Query: 419 tccctccatggcctctgcatcagctcctgcttcctgacctgtttgagttccagtcctgac 478
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 621 tccctccatggcctctgcatcagctcctgcttcctgccctgcttgagttccagtcctgac 680
Query: 479 tttcttggtgataaacagcagtatggaattgtaagctgaataaaccctttcctcccaaac 538
|| ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 681 ttccttggtgatgaacagcagtatggaagtgtaagccgaataaaccctttcctcccaaac 740
Query: 539 ttgcttcttggtcataatgtttgtgcaggaatagaaaccctgactaagacagaggctgac 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttgcttcttggtcataatgtttgtgcaggaatagaaaccctgactaagacagaggctgac 800
Query: 599 cttggtttccccacaatgtcagttcaggaataacataa 636
||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cttggtttccccacaatgtcagttcaggaataacataa 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
