Query= MSMg01no531_c20.b1 MSMg01no531_c20.b1 CHROMAT_FILE:
MSMg01no531_c20.b1 PHD_FILE: MSMg01no531_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:44 2005
(612 letters)
>mm_chr2_162052471_162053482
Length = 1012
Score = 893 bits (462), Expect = 0.0
Identities = 468/471 (99%), Gaps = 2/471 (0%)
Strand = Plus / Minus
Query: 144 ttctcacaggaaaaacataaagct--acacacacacacacacacacacacacacacacac 201
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1012 ttctcacaggaaaaacataaagctacacacacacacacacacacacacacacacacacac 953
Query: 202 acacacacacacacacacacacaagccttatgtgcatagcaatcatcaacttcagtggag 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 acacacacacacacacacacacaagccttatgtgcatagcaatcatcaacttcagtggag 893
Query: 262 gcttatgccctgctgtctctgttccaggggcagtaaccatgttgcactatcctttccaca 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 gcttatgccctgctgtctctgttccaggggcagtaaccatgttgcactatcctttccaca 833
Query: 322 tggccaaacaggactcagcacatattgctcacctaatggtcaggaagcaagagcagaaga 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 tggccaaacaggactcagcacatattgctcacctaatggtcaggaagcaagagcagaaga 773
Query: 382 gactaaggtcctggagttccctgggtgggaaaccctagatgaccttatagcctgctttag 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gactaaggtcctggagttccctgggtgggaaaccctagatgaccttatagcctgctttag 713
Query: 442 ttacttttgtatgacaatagtcaaaggttcaactgaagaactaaaggacatatttgtctt 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ttacttttgtatgacaatagtcaaaggttcaactgaagaactaaaggacatatttgtctt 653
Query: 502 agctcatactttcagaaagcttaatctataatttcttgactctatgtccttgagcaaaat 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agctcatactttcagaaagcttaatctataatttcttgactctatgtccttgagcaaaat 593
Query: 562 accatagtagtggcagagcatgtggctaanggaatccttcatgaaagacag 612
||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 592 accatagtagtggcagagcatgtggctaagggaatccttcatgaaagacag 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 70
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_c20.g1 MSMg01no531_c20.g1 CHROMAT_FILE:
MSMg01no531_c20.g1 PHD_FILE: MSMg01no531_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:44 2005
(625 letters)
>mm_chr2_161888285_161889309
Length = 1025
Score = 1208 bits (625), Expect = 0.0
Identities = 625/625 (100%)
Strand = Plus / Plus
Query: 1 atttgctattggtatggtccacacaaagctccagtttaggactctggcctgtcagcttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttgctattggtatggtccacacaaagctccagtttaggactctggcctgtcagcttga 260
Query: 61 tctgtgatagaaaacttcctctgcctatgccattagctcctgccatgctaagggacggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgtgatagaaaacttcctctgcctatgccattagctcctgccatgctaagggacggtc 320
Query: 121 tctcctcttagtagacagcaggataacttttagtaagtttcattatctctgtgaatgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcctcttagtagacagcaggataacttttagtaagtttcattatctctgtgaatgaaa 380
Query: 181 atgatcacacagactatctccaactttgtttattcttttctcatagttacaaaaccagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgatcacacagactatctccaactttgtttattcttttctcatagttacaaaaccagcc 440
Query: 241 agcaaatcccctatgtgtgagaagcagcggctgatccatcagtctagtcatgcctggcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcaaatcccctatgtgtgagaagcagcggctgatccatcagtctagtcatgcctggcag 500
Query: 301 cagatgcatgcagctaggaggagaggtccaaactaatgttcaggatgaacttttacagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagatgcatgcagctaggaggagaggtccaaactaatgttcaggatgaacttttacagct 560
Query: 361 cagtgtcctgcacaggtgtactaaggatcacacaatgtcaaaatacccccaaagagcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtgtcctgcacaggtgtactaaggatcacacaatgtcaaaatacccccaaagagcaga 620
Query: 421 gtaccccaaagctcccccctcactcaccactagatgctgcaattgccagaactctatatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtaccccaaagctcccccctcactcaccactagatgctgcaattgccagaactctatatt 680
Query: 481 ctagtggtcaggtgacctctaacagcccccaggcttcaaagtctcaaagtctatggagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctagtggtcaggtgacctctaacagcccccaggcttcaaagtctcaaagtctatggagag 740
Query: 541 ggctccacctccttcacagagcagttctccccaccagtcttccatgtctccctttagcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggctccacctccttcacagagcagttctccccaccagtcttccatgtctccctttagcac 800
Query: 601 ctcatcccactctttcttctttaca 625
|||||||||||||||||||||||||
Sbjct: 801 ctcatcccactctttcttctttaca 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
