Query= MSMg01no531_e07.b1 MSMg01no531_e07.b1 CHROMAT_FILE:
MSMg01no531_e07.b1 PHD_FILE: MSMg01no531_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:50 2005
(452 letters)
>mm_chr2_108752539_108753390
Length = 852
Score = 835 bits (432), Expect = 0.0
Identities = 447/452 (98%)
Strand = Plus / Plus
Query: 1 tgaaaatgaactaagatcaccttatctagaaagagtgtaaagcagaggacacatataacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaaaatgaactaagatcaccttatctagaaagagtgtaaagcagaggacacatataacc 260
Query: 61 acgtaaacagcatctgtatttatttatcattttaaggggatatgaaaaacgtgtagaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgtaaacagcatctgtatttatttatcattttaaggggatatgaaaaacgtgtagaatg 320
Query: 121 tccttctgcctcttttggagggagagcagtgattaaaaattaagctccttttatccagga 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 tccttctgcctcttttggagggagagcagtgattaaaatttaagctccttttatccagga 380
Query: 181 cacattattgtattacagtttccacagggattgagaattcatgttctatgacaaaatata 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacattattatattacagtttccacagggattgagaattcatgttctatgacaaaatata 440
Query: 241 ggggataaacactaatatttatatacatctaaggcccccaaggcatttctgtgaagtgca 300
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 gggaataaacactaatatttatatacatccaaggcccccaaggcatttctgtgaagtgca 500
Query: 301 aaatgaaagaaacataatattgcattttataataatttgtcctttctctgacctctgatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatgaaagaaacataatattgcattttataataatttgtcctttctctgacctctgatg 560
Query: 361 aagctttttaccatactgtctgcaaactgttccctagttgttaagtttgtctcttttatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagctttttaccatactgtctgcaaactgttccctagttgttaagtttgtctcttttatc 620
Query: 421 ctcagactcccttaaaatatccaagagcaaaa 452
|||||||||||||||||||||||||| |||||
Sbjct: 621 ctcagactcccttaaaatatccaagaacaaaa 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_e07.g1 MSMg01no531_e07.g1 CHROMAT_FILE:
MSMg01no531_e07.g1 PHD_FILE: MSMg01no531_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:51 2005
(386 letters)
>mm_chr2_108916604_108917387
Length = 784
Score = 704 bits (364), Expect = 0.0
Identities = 380/386 (98%), Gaps = 2/386 (0%)
Strand = Plus / Minus
Query: 1 atgttttaaagggagaaaaaaatgtgggtaataaatccacatggagggtttaagtaagtg 60
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 atgttttaaagggag--aaaaatgtgggtaataaatccacatggagggtttaagtaagtg 527
Query: 61 catgacataaagaaaataaagagacctgaaaattaaaaagcataaactgaaacatcttga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 526 catgacataaagaaaataaagagacctgaaaattaaaaagcataaactgaaacaccttga 467
Query: 121 attgaaatagcactcaggtccacaaacttaagaactcagtagatgtgagaacagttgaga 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 attgaaatagcactcaggttcacaaacttaagaactcagtagatgtgagaacagttgaga 407
Query: 181 cataataatgtggtgtgggaaaggtgtggattctcgaagggaagcacctgaaaggaagcg 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cataataatgtggtgtgggaagggtgtggattctcgaagggaagcacctgaaaggaagcg 347
Query: 241 cacagtgacaaaaggaaagctgtgagagacatatgggtgtggaaaagacaagacatggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cacagtgacaaaaggaaagctgtgagagacatatgggtgtggaaaagacaagacatggga 287
Query: 301 gtgtgtgaagacgtgggtgtataaaagatatgagtgtgcaaaagacaagacatatgaatg 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtgtgtgaagacatgggtgtataaaagatatgagtgtgcaaaagacaagacatatgaatg 227
Query: 361 tgtgaaagacaagacatgaattacaa 386
||||||||||||||||||||||||||
Sbjct: 226 tgtgaaagacaagacatgaattacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 784
Length adjustment: 9
Effective length of query: 377
Effective length of database: 775
Effective search space: 292175
Effective search space used: 292175
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|