Query= MSMg01no531_j07.b1 MSMg01no531_j07.b1 CHROMAT_FILE:
MSMg01no531_j07.b1 PHD_FILE: MSMg01no531_j07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:15 2005
(619 letters)
>mm_chr2_10126103_10127121
Length = 1019
Score = 1137 bits (588), Expect = 0.0
Identities = 609/616 (98%)
Strand = Plus / Minus
Query: 1 cactatgctagatgtgagcccttgcataacccaagccatatgtaaactacattaatagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 cactatgctagatgtgagcccttgcataacccaagccatatgtaaactacattaatagta 757
Query: 61 atgccaatgtcatgctcttagaaagacctaatgacaggctgtgcttatcaccattctagt 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 756 atgccaatgtcatgctcttagacagacctaatgacaggctgtgcttatcaccattctagt 697
Query: 121 ttgtggaaaacatcacaccaagtttgttgttatcaaacataagcattttcaaagtaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ttgtggaaaacatcacaccaagtttgttgttatcaaacataagcattttcaaagtaggag 637
Query: 181 gaggaattcgatagtgcattatagacatggcacacttaggatggtatatgactatcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gaggaattcgatagtgcattatagacatggcacacttaggatggtatatgactatcaaaa 577
Query: 241 tgcaagaagcctgatggaaagtctgccggtgacgctgacagtcatgttgaggctcagcgt 300
|||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||
Sbjct: 576 tgcaagaagcctgatggaaagtttgccagtgatgctgacagtcatgttgaggctcagcgt 517
Query: 301 cagagcacagagagcatattctctgatcctcatttatatagcgttcaaagtcaaacacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cagagcacagagagcatattctctgatcctcatttatatagcgttcaaagtcaaacacaa 457
Query: 361 ctcatccagaggcaactgaagtatggcgggtgatcctttgagaggaaagatcctaacttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ctcatccagaggcaactgaagtatggcgggtgatcctttgagaggaaagatcctaacttg 397
Query: 421 gaaagaatacaaaagaatctttgaagagaagtgtcctatgtttgatgtactatgggtgtg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gaaagaatacaaaagaatctttgaagagaagtgtcctatgtttgatgtactatgggtgta 337
Query: 481 cttagtttgaagggatgtgtcctaggtttgatgtagcaaaatgggtgtacctagtgtaaa 540
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 336 cttagtttgaatggatgtgtcctaggtttgatgtagcagaatgggtgtacctagtgtaaa 277
Query: 541 tgtacaaatgtgtatataactcagcaagacttacacataagttatatgcactttattcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgtacaaatgtgtatataactcagcaagacttacacataagttatatgcactttattcta 217
Query: 601 ttttatttatttaagc 616
||||||||||||||||
Sbjct: 216 ttttatttatttaagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_j07.g1 MSMg01no531_j07.g1 CHROMAT_FILE:
MSMg01no531_j07.g1 PHD_FILE: MSMg01no531_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:15 2005
(608 letters)
>mm_chr2_9979262_9980269
Length = 1008
Score = 1114 bits (576), Expect = 0.0
Identities = 603/616 (97%), Gaps = 8/616 (1%)
Strand = Plus / Plus
Query: 1 tcagatgaaaaatgaacagagcaatca----gagaagaaggaagaatggaagcccgggca 56
||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 193 tcagatgaagactgaacagagcaatcaatcagagaagaaggaagaatggaagcccgggca 252
Query: 57 aaaccctcttagaaatcagaaacagcctgatgtgtttaaagacctgggaaggtccaggta 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aaaccctcttagaaatcagaaacagcctgatgtgtttaaagacctgggaaggtccaggta 312
Query: 117 gccgaggtccaaggaagtgactacaatattatatgagaaagattgctgatggccagagag 176
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 313 gccgaggtccaaggaagtgactaaaatattatatgagaaagattgctgatggccagagag 372
Query: 177 tacaggatcacatacaacaaagtagagtattttgcaggctgcttctgtaaaaagccagca 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tacaggatcacatacaacaaagtagagtattttgcaggctgcttctgtaaaaagccagca 432
Query: 237 aggaagcattttaggccttggaggctata----cacttttttataaccctttacaatatg 292
||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 433 aggaagcattttaggccttgggggctatatatacacttttttataaccctttacaatatg 492
Query: 293 accttggaccacagtttctcagtaatctccgtaattctgcactgtcagagacagtaaatt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 accttggaccacagtttctcagtaatctccgtaattctgcactgtcagagacagtaaatt 552
Query: 353 ctctgaaaacaaacactgcctccactccatcttgaggatctggcatctacaaatcacatc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ctctgaaaacaaacactgcctccactccatcttgaggatctggcatctacaaatcacatc 612
Query: 413 ttttgccaggccagccttgatgccagctactgaggagatagagagggaagcttgagcctt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttttgccaggccagccttgatgccagctactgaggagatagagagggaagcttgagcctt 672
Query: 473 tgagtttgggaatagcttaggtaacacagcaaacccttttacatttagaaatgggaggaa 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgagtttgggaatagcttaggtaacacagcaaacccttttacatttagaaatgggaggaa 732
Query: 533 aaaggaaagattaaagggggatctagaagataaaactcagagaacttggtgaccagtcag 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 aaaggaaagattaaagggggatctagaagataaaactcagagaacttggtgaccagtcag 792
Query: 593 gaggaaaaagccttag 608
||||| ||||||||||
Sbjct: 793 gaggagaaagccttag 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
