NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTCTGTTCTGAGCCCCATTTTTTTAATGGGGTTATTTGA
TTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATTGTTGGATATTAGTCC
CCTATCTGATTTAGGATAAGTAAAGATCCTTTCGCAATCTGTTGTTGGTC
TTTTTGTCTTATTGACGGTGTCTTTTGCTTTGCAGAAGCTTTGCAATTTT
ATGAGGTCCCATTTATTGATTCTTGATCTTACAGCACAAGCCATTGTTGT
TCTATTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCA
CTTTCTCCTCTATAAGTTTCAGTGTCTATGGTTTTATGTGAAGTTCCTTG
ATCCACTTAGATTTGACCTTAGTACAAGGAGATAGGAATGGATCGATTTG
AATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAA
TGCTGTCTTTCTTCCACTGGATGGTTATAGCTCCCTTGTCAAAGATCAAG
TGACCATAGGTGTGTGGGTTCTTTTCCTGTTCTTCAATTCTATTCCATTG
GTCTACTTGTCTGTCTCTATACCAGTACAATGCAGTTTTTATCACAATTG
CTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTT
TTATCCTTGAGAAGAGTTTTTGCTATCCTAGGTTTTTTGTTATTCCAGAT
GAN

NACTATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAGTATGTGTGACAACTGGC
ATTGATTCCATGCAAATCAGGTCTTATTAAAAGTCATGTATGACTAAGAA
GAGGCTTGGGGCCTTCAACTTCCTGCTGATCTATTTGCAGCTAATAGAGA
TACCACCCAGTTTTATACACACCAGTGAGCCCACAGATCTCTAACAATTA
GTTGCAAAACCCAGGATTATACAGGCAGTTCCTAGTAAAACCCCACTGGA
TACTAGACAGAACAAAAACCAAATGAATGTTGCAGGGATTTATATGGAAG
GAGTCAGACTGGCAGGCCCTGAAGGAAAATAAGGGGTTGGGAGAAAGTAA
CCAGAATGTATGAAATTGTCAAAGAACAGCACTTATTAATATAAAAAGAA
AGAAACCGAAACAGAAATCAAGACTAAAGCTGTGAAAAACACAGCTTTTC
AAATCAGAAAGAGGAAGTTTCAAGCAAAACTATTTTTTTCTAATAAAGGA
AATAAAGTTGTCTAGAAGATGTAGGAGGACTTTGAAAGCAAATATAAAAT
AAGAATGTTTTCTGGTTGATTTGATATTAGGTTATCTTGACAGACAAAAT
AAAAAGCCCCTAAGGACTTCAGTGTAGAAATTCGTATTTTCTTAGTCTGG
GCTTCAAGCTGGTCTAAGAATTTTGGGATTCTGACTAGCAGTAGATGATA
GATTN

Query= MSMg01no531_p20.g1 MSMg01no531_p20.g1 CHROMAT_FILE:
MSMg01no531_p20.g1 PHD_FILE: MSMg01no531_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:47 2005
         (587 letters)



>mm_chr2_139270893_139271879
          Length = 987

 Score = 1096 bits (567), Expect = 0.0
 Identities = 582/587 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagagtatgtgtgacaactggcattgattccatgcaaatcaggtcttattaaaagtcatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 aagagtatgtgtgacaactggcattgattccatgcaaatcaggtcttattaaaagtcatg 728

                                                                       
Query: 61  tatgactaagaagaggcttggggccttcaacttcctgctgatctatttgcagctaataga 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 727 tatgactaagaagaggcttggggccttcaacttcctgctgatctatttgcagctaatata 668

                                                                       
Query: 121 gataccacccagttttatacacaccagtgagcccacagatctctaacaattagttgcaaa 180
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 667 gataccacccagttttatacacaccagtgagcccacagatctctgacaattagttgcaaa 608

                                                                       
Query: 181 acccaggattatacaggcagttcctagtaaaaccccactggatactagacagaacaaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 acccaggattatacaggcagttcctagtaaaaccccactggatactagacagaacaaaaa 548

                                                                       
Query: 241 ccaaatgaatgttgcagggatttatatggaaggagtcagactggcaggccctgaaggaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ccaaatgaatgttgcagggatttatatggaaggagtcagactggcaggccctgaaggaaa 488

                                                                       
Query: 301 ataaggggttgggagaaagtaaccagaatgtatgaaattgtcaaagaacagcacttatta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 487 ataaggggttgggagaaagtaaccagaatgtatgaaattgtcaaagaacagcatttatta 428

                                                                       
Query: 361 atataaaaagaaagaaaccgaaacagaaatcaagactaaagctgtgaaaaacacagcttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atataaaaagaaagaaaccgaaacagaaatcaagactaaagctgtgaaaaacacagcttt 368

                                                                       
Query: 421 tcaaatcagaaagaggaagtttcaagcaaaactatttttttctaataaaggaaataaagt 480
           |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 367 tcaaatcagaaagaggaagtttcaagcaaaaaaatttttttctaataaaggaaataaagt 308

                                                                       
Query: 481 tgtctagaagatgtaggaggactttgaaagcaaatataaaataagaatgttttctggttg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tgtctagaagatgtaggaggactttgaaagcaaatataaaataagaatgttttctggttg 248

                                                          
Query: 541 atttgatattaggttatcttgacagacaaaataaaaagcccctaagg 587
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atttgatattaggttatcttgacagacaaaataaaaagcccctaagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)