Query= MSMg01no532_a13.b1 MSMg01no532_a13.b1 CHROMAT_FILE:
MSMg01no532_a13.b1 PHD_FILE: MSMg01no532_a13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:51 2005
(432 letters)
>mm_chr2_80309459_80310290
Length = 832
Score = 779 bits (403), Expect = 0.0
Identities = 415/421 (98%), Gaps = 4/421 (0%)
Strand = Plus / Plus
Query: 16 gaattcaaggccagttataccccattagcacttggtggtggccaacctgagacctcttca 75
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattcaaggccaggaataccccattagcacttggtggtggccaacctgagacctcttca 275
Query: 76 cagaccctcatgcttcagaggtgaagatgtaactgtcttgagtccctcaccattgccatc 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cagaccctcatgcttcagaggtgaagatgtaactgtcttgagtccctcaccattgccatc 335
Query: 136 ccctgtgcctttcccattaacactgcaaactgtaatcttggaatcatggcttggtctttc 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ccctgtgcctttcccattaacactgcaaactgtaatcttggaatcatggcttggtctttc 395
Query: 196 agtgttccagcatccatccagaaatacagctgtagtaacctaaacaaagaccttaaacac 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agtgttccagcatccatccagaaatacagctgtagtaacctaaacaaagaccttaaacac 455
Query: 256 ccaggcactttgcaagctctgtgtcagataatgaagtcaaaaaccatacatgtatatgtg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ccaggcactttgcaagctctgtgtcagataatgaagtcaaaaaccatacatgtatatgtg 515
Query: 316 taagtatttgtgtatgtgtttgtatttgtgtgtatatgtatatatatatatatat----g 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 516 taagtatttgtgtatgtgtttgtatttgtgtgtatatgtatatatatatatatatatatg 575
Query: 372 aatttcattattttatgcaaatataacagaattggtaatgtgttctgacttgtacactaa 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aatttcattattttatgcaaatataacagaattggtaatgtgttctgacttgtacactaa 635
Query: 432 g 432
|
Sbjct: 636 g 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_a13.g1 MSMg01no532_a13.g1 CHROMAT_FILE:
MSMg01no532_a13.g1 PHD_FILE: MSMg01no532_a13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:51 2005
(358 letters)
>mm_chr2_80486106_80486863
Length = 758
Score = 656 bits (339), Expect = 0.0
Identities = 351/357 (98%), Gaps = 4/357 (1%)
Strand = Plus / Minus
Query: 1 ctttaatgtattaattaatagaggtgtttctatcagctcacacttgcaaaggtggagtct 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ctttaatatattaattaatagaggtgtttctatcagctcacacttgcaaaggtggagtct 298
Query: 61 cacttttcatcttctgtcctgaccagcattaactcaaaatctggcaagatcacatttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 cacttttcatcttctgtcctgaccagcattaactcaaaatctggcaagatcacatttcct 238
Query: 121 ttggctcctttagtgtatagtttacagtaggaagcatgaggctggtgacatggctcaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ttggctcctttagtgtatagtttacagtaggaagcatgaggctggtgacatggctcaggg 178
Query: 181 ctaagtgctcttgctgccaagcttactgcctgagctcagtcctcagctccacatggtggg 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 177 ctaagtgctcttgctgccaagcttactgcctgagctcagtccccagctccacatggtggg 118
Query: 241 aagagggcctactcctgcaggctagcctatggcctctacagtgcatctcatcacacacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 aagagggcctactcctgcaggctagcctatggcctctacagtgcatctcatcacacacat 58
Query: 301 acacacacacaatataaagaaaaacctaatttgaaaggcgttacattgggtaacgaa 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 ----acacacaatataaagaaaaacctaatttgaaaggcgttacattgggtaacgaa 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
