Query= MSMg01no533_n12.b1 MSMg01no533_n12.b1 CHROMAT_FILE:
MSMg01no533_n12.b1 PHD_FILE: MSMg01no533_n12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:09 2005
(646 letters)
>mm_chr2_135651774_135652819
Length = 1046
Score = 1195 bits (618), Expect = 0.0
Identities = 630/634 (99%)
Strand = Plus / Plus
Query: 13 gaattcacagaaatctgctggaacagccagaaggcatcctctatttcccttttcatctgc 72
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 213 gaattcacagaaatctgctggaacagccagaaggcatcctctatttcccttctcatctgc 272
Query: 73 ttatggaaggaaagagaataacccataaaagaaatattcagaaatactcagacacaggca 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttatggaaggaaagagaataacccataaaagaaatattcagaaatactcagacacaggca 332
Query: 133 gttttctgtgagacataagcaaaatagtaattaaatgaaaaattaagaaatttctcctgg 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gttttctgtgagacataagcaaaatagtaattaaatgaaaaattaagaaatttctcctgg 392
Query: 193 ttttaggcttattatttcactacaagggtggtgtttccttgaatgacacttgtctgcctt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ttttaggcttattatttcactacaagggtggtgtttccttgaatgacacttgtctgcctt 452
Query: 253 tcttgataccagcaatgatttttggctgcagtgaaagcagacaccctcccctctgtctac 312
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 453 tcttgataccagcaatgatttttggctgcagtgaaagcagacaccctcccctctgtctgc 512
Query: 313 tcatcttgccctcatgcatatcccctctgcatttcctgctgtcagggaagctggagtcgg 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tcatcttgccctcatgcatatcccctctgcatttcctgctgtcagggaagctggagtcgg 572
Query: 373 catgtcggtctgtcaatcatgtttttatttttctctttgcaaacagtagcagcacacata 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 catgtcggtctgtcaatcatgtttttatttttctctttgcaaacagtagcagcacacata 632
Query: 433 taattcaaaacctttaatacttgaaacccactgaagcaaaagcaaaatgagaaacaaaat 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 taattcaaaacctttaatacttgaaacccactgaagcaaaagcaaaatgagaaacaaaat 692
Query: 493 tggccatgcatgaaaaaataaaaggaaacgaaagcacttgattagtgtggctcaacactg 552
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 693 tggccatgcatgaaaaaataaaaggaaacgaaagcacttgattagtgtggttcaacactg 752
Query: 553 cacacagttgttcaagacagggctgtggcagatgagtcaacagatacctagagtagtctc 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 cacacagttgttcaagacagggctgtggcagatgagtcaacagatacctagagtagtctc 812
Query: 613 agaattgggtagccatgcaccaagggcaaagctg 646
|||||||||||||||||| |||||||||||||||
Sbjct: 813 agaattgggtagccatgcgccaagggcaaagctg 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_n12.g1 MSMg01no533_n12.g1 CHROMAT_FILE:
MSMg01no533_n12.g1 PHD_FILE: MSMg01no533_n12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:09 2005
(557 letters)
>mm_chr2_135780625_135781580
Length = 956
Score = 1046 bits (541), Expect = 0.0
Identities = 553/557 (99%), Gaps = 1/557 (0%)
Strand = Plus / Minus
Query: 1 tctggaacgcttacaaatgcattcagactccataaagccctcctatggaccacggacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 tctggaacgcttacaaatgcattcagactccataaagccctcctatggaccacggacttt 697
Query: 61 aataacaagtgcttaatgaacaacctggcaggtatataatgaagttcaaaaaacggtcat 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 696 aataacaagtgcttaatgaacaacctggcaggtatataatgaagttc-aaaaacggtcat 638
Query: 121 gtgactttgcctgagtatttactttggagttgggaacttgacctctgtgtcttaggacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gtgactttgcctgagtatttactttggagttgggaacttgacctctgtgtcttaggacat 578
Query: 181 cagtctggagcttttcccacagcgacgggctcccatgagtgttgaaccctgggcacacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 cagtctggagcttttcccacagcgacgggctcccatgagtgttgaaccctgggcacacat 518
Query: 241 ttgttcacctggaggacttaaatcatgcacctgcttatgaccctgggtcaatcagaaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ttgttcacctggaggacttaaatcatgcacctgcttatgaccctgggtcaatcagaaccg 458
Query: 301 aaccagtgtaggtggggccctagtgcaggtgcttttacgggtatctgaagtgactcagag 360
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aaccggtgtaggtggggccctagtgcaggtgcttttacgggtatctgaagtgactcagaa 398
Query: 361 tgcaatggacactgggacgcacggaggggcctggactcttggcttggaagctttatgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tgcaatggacactgggacgcacggaggggcctggactcttggcttggaagctttatgaaa 338
Query: 421 cataaaacacgaggtcctaagagcagccggattaaaccaagtcagatgtttactttgtgt 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cataaaacacgaggtcctgagagcagccggattaaaccaagtcagatgtttactttgtgt 278
Query: 481 tcctctctacatccctctgaagcacgataaaagctttttgtaccagagaatctaaataaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tcctctctacatccctctgaagcacgataaaagctttttgtaccagagaatctaaataaa 218
Query: 541 tatgaaaatccttagta 557
|||||||||||||||||
Sbjct: 217 tatgaaaatccttagta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 956
Length adjustment: 10
Effective length of query: 547
Effective length of database: 946
Effective search space: 517462
Effective search space used: 517462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
