Query= MSMg01no534_f01.b1 MSMg01no534_f01.b1 CHROMAT_FILE:
MSMg01no534_f01.b1 PHD_FILE: MSMg01no534_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:47 2005
(654 letters)
>mm_chr2_67715552_67716606
Length = 1055
Score = 1230 bits (636), Expect = 0.0
Identities = 648/652 (99%), Gaps = 1/652 (0%)
Strand = Plus / Minus
Query: 4 ggaattcactgatttgtagtcaattaatttgtcttactattgctaaatttttcttaaatt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 ggaattcactgatttgtagtcaattaatttgtcttactattgctaaatttttcttaaatt 796
Query: 64 tactgaaccaaagatgctctcagttttaaggtgcaacttcatttctgatgtgtcaatcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tactgaaccaaagatgctctcagttttaaggtgcaacttcatttctgatgtgtcaatcaa 736
Query: 124 gtttacaaatgtgtatcttgcaaataataaaggatgaagacatattctgaagggcgactt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gtttacaaatgtgtatcttgcaaataataaaggatgaagacatattctgaagggcgactt 676
Query: 184 ctaacaggatgctttagttagcaagtcaggggaggatactaacagctataagccacagat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ctaacaggatgctttagttagcaagtcaggggaggatactaacagctataagccacagat 616
Query: 244 aataatatttcatctgtaggtttggttaagtaaaggattcagaaacatttatgtcttggt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aataatatttcatctgtaggtttggttaagtaaaggattcagaaacatttatgtcttggt 556
Query: 304 cacttttttgggagacattagcttttgtccccactgttgcacagaagtaactctaagtag 363
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 555 cacttttttgggagacattagcttttgtccccactgttgcatagaagtagctctaagtag 496
Query: 364 gttctatgactccaggccacatggctcacactatccaaaattaagtttattttttca-at 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 495 gttctatgactccaggccacatggctcacactatccaaaattaagtttattttttcatat 436
Query: 423 gtctatttatcagtaataagcctttcttaagactcaccccagtagactagacttcatgct 482
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 435 gtctatttatcagtaataagcctttcttaagactcaccccagtagactagtcttcatgct 376
Query: 483 tctttagctggagttgctccacgtgacttttccaagtgaattctgggtaaaaaaagaaat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tctttagctggagttgctccacgtgacttttccaagtgaattctgggtaaaaaaagaaat 316
Query: 543 gaaacatcttgtttgataaagtgattaatgtgtccaaccactggggttggtatcagtttt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gaaacatcttgtttgataaagtgattaatgtgtccaaccactggggttggtatcagtttt 256
Query: 603 ctttgtcaaaacataggcatttgagggagacatctacaaaatatggaattgc 654
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctttgtcaaaacataggcatttgagggagacatctacaaaatatggaattgc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_f01.g1 MSMg01no534_f01.g1 CHROMAT_FILE:
MSMg01no534_f01.g1 PHD_FILE: MSMg01no534_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:47 2005
(462 letters)
>mm_chr2_67578662_67579523
Length = 862
Score = 808 bits (418), Expect = 0.0
Identities = 451/462 (97%)
Strand = Plus / Plus
Query: 1 acacagtagtttgtattaaataataaaggaaatttaaacataaaatgtaaaaagtaaatt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 acacagtagtttgtattaaataataaaggaaatttaaaaataaaatgtaaaaagtaaatt 260
Query: 61 tcagaaaaaaagcagattcatgattagagcatatatattaaaataagtttttacttcaac 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 261 tcagaaaaaaagcagattcatgattagagcatatatattaaagtaagtttttatttcaac 320
Query: 121 aaattatttggaagcatctttagaacaacaatatgaaactcaaagcgatgtgtattttat 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 aaattatttggaagcatctttagaacaacaatatgaaactcaaagtgatgtgtattttat 380
Query: 181 aaagttagattagaaaagtttctgtgagagtcaggtatggtggtacacacttaataattg 240
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagttagattagaagattttctgtgagagtcaggtatggtggtacacacttaataattg 440
Query: 241 gactgtggacgtggaaggagttcgcatcattggccacacataccagcctagtttacattg 300
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 441 gactgtggacgtggaaggagttcacattattggccacacataccagcctagtttacattg 500
Query: 301 catcctgttgataaataaaaatgtcagaggaaagagaaatggctgcataagaaacaatga 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgtcctgttgataaataaaaatgtcagaggaaagagaaatggctgcataagaaacaatga 560
Query: 361 aattgaattcagcaagtattatatgtatttgtgcataaatatttatgcatgcatacattt 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 aattgaattcagcaagtattatatgtatttgtgcagaaatatttatgcatgcatacattt 620
Query: 421 ctacaacaataataataaaagagaaattgactttcaagttaa 462
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 ctacaacaataataataaaagaaaaattgactttcaagttaa 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
