AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAACATTATAATTATACACCCGCAATGTGTGATTTGATATATTTACAC
TACTGTGTCAATCAGTTGTTAATTCTGCTTGCAAAACCATTAGAAGCATA
AAACGGGACCTTGTAATGCCGGGACATTGGAGATAGCCCTCTTTGGGTAT
GCCTGGACAAGACCTGGCAGTCTTCCCTGCTTGGCAGTCAACCTTTTTTT
CTCCTGCAGTTCTGCCCATTGTAGGGGTGTCAGATGCCAAGGGGCAGAAT
GGATTCGGAGGAAGCTGGCGTCACTAAAGCATGAATGGCCTTTACTGCTT
CTGTGCCAAAGGGCTGAACCTCCCTGGGTGGGAGGACAAGGAGAGCTAGC
TGGAGGGTCAGGGAACTCCATCATCTTGTGAGGGCTTCGGCCAAATGCAG
GGCTGGTGCTGTTGTTCAGAAAGAGGGAGCTGGTGTGAGAGGCCCAGGGG
CTTTCTTATGCAGTAGAGTGGAGCTTGATCAACACAGCATGAGGCTCTCT
TGTCATGGGCTTATCTGGAGCCCAGTGTCTCTGCTGAAGAGCCTTGCAGG
TTGTCAGGTTAGTGCTTGTTTGGTAAGAGAATGAAAAGCTGGGACCGAGT
TGCAAATTAACTGGGGAGACTTCTCTGGCAAGTAAAAAAACAAGACAAAA
CAAAACAAAACAAAACAAAACAAAAACAATGCATGCTTTCTTCTTTTGTG
GATGCAAGATTTCATAGGTACATAAATCCACAT

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGTCTCTACCACCCCAGTGCAACACT
GATGCAATAGACAAGTACTATCACCACAACTTTTTTACATGGATACTGGA
AATCCAAACTTAGGAAGTCATGCTTGTATAGCAAACACTTTACTGATTCA
GCCATCTTTCAAGCCCTATTCTCCAAAAGTTTTGTAAAAAGGCCTATTTG
GGTAGGTGACAAGTCTTGGGTCAAACTTTATAGACAGATTAATGCTATTA
CCTAGAGTCCTTGTAGCCACAAAATTAATTTTTAAAAAAATCTAACAGCC
CAGAAGAAAAATATTCTTTTCTGCCAGAGACTCCTACAAGGATTTTTTTT
CTCATGAAAAGAATTCTATGAAAAGACACACAGTGTCTTTACCTGAACAC
AGGAACACAGAGCACAACAGTACACTCTGTCCCCAACAAACACAGGTCAG
AATACAGGCCAGTACACATGGCTCTCTTGTGGCTAACACATGGTGGGGGG
AGGGGTGTCACATTGTGTGGCTTGCTGGTGATGGTCTAATTTGGAGTGGG
TTGAGACTACCAGAGTAGGGGTTTTCAAATGGGGTCCTACTTAGTCAATG
GGGAAGTAATGACTGATAATTAGTCTAAAACTCAGTACCCTTCCTCCCAG
GGGCATTGCCCAAATCCTACTCTATGTTAGTGCATTAGTTACATTTGAGT
TATACCTGAGAGAAGCAACTTTTAAAG

Query= MSMg01no535_h01.b1 MSMg01no535_h01.b1 CHROMAT_FILE:
MSMg01no535_h01.b1 PHD_FILE: MSMg01no535_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:16 2005
         (677 letters)



>mm_chr2_147079584_147080660
          Length = 1077

 Score = 1301 bits (673), Expect = 0.0
 Identities = 673/673 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaacattataattatacacccgcaatgtgtgatttgatatatttacactactgtg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacattataattatacacccgcaatgtgtgatttgatatatttacactactgtg 264

                                                                       
Query: 65  tcaatcagttgttaattctgcttgcaaaaccattagaagcataaaacgggaccttgtaat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaatcagttgttaattctgcttgcaaaaccattagaagcataaaacgggaccttgtaat 324

                                                                       
Query: 125 gccgggacattggagatagccctctttgggtatgcctggacaagacctggcagtcttccc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gccgggacattggagatagccctctttgggtatgcctggacaagacctggcagtcttccc 384

                                                                       
Query: 185 tgcttggcagtcaacctttttttctcctgcagttctgcccattgtaggggtgtcagatgc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgcttggcagtcaacctttttttctcctgcagttctgcccattgtaggggtgtcagatgc 444

                                                                       
Query: 245 caaggggcagaatggattcggaggaagctggcgtcactaaagcatgaatggcctttactg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caaggggcagaatggattcggaggaagctggcgtcactaaagcatgaatggcctttactg 504

                                                                       
Query: 305 cttctgtgccaaagggctgaacctccctgggtgggaggacaaggagagctagctggaggg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttctgtgccaaagggctgaacctccctgggtgggaggacaaggagagctagctggaggg 564

                                                                       
Query: 365 tcagggaactccatcatcttgtgagggcttcggccaaatgcagggctggtgctgttgttc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcagggaactccatcatcttgtgagggcttcggccaaatgcagggctggtgctgttgttc 624

                                                                       
Query: 425 agaaagagggagctggtgtgagaggcccaggggctttcttatgcagtagagtggagcttg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agaaagagggagctggtgtgagaggcccaggggctttcttatgcagtagagtggagcttg 684

                                                                       
Query: 485 atcaacacagcatgaggctctcttgtcatgggcttatctggagcccagtgtctctgctga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atcaacacagcatgaggctctcttgtcatgggcttatctggagcccagtgtctctgctga 744

                                                                       
Query: 545 agagccttgcaggttgtcaggttagtgcttgtttggtaagagaatgaaaagctgggaccg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agagccttgcaggttgtcaggttagtgcttgtttggtaagagaatgaaaagctgggaccg 804

                                                                       
Query: 605 agttgcaaattaactggggagacttctctggcaagtaaaaaaacaagacaaaacaaaaca 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agttgcaaattaactggggagacttctctggcaagtaaaaaaacaagacaaaacaaaaca 864

                        
Query: 665 aaacaaaacaaaa 677
           |||||||||||||
Sbjct: 865 aaacaaaacaaaa 877


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no535_h01.g1 MSMg01no535_h01.g1 CHROMAT_FILE:
MSMg01no535_h01.g1 PHD_FILE: MSMg01no535_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:16 2005
         (701 letters)



>mm_chr2_147264492_147265592
          Length = 1101

 Score = 1226 bits (634), Expect = 0.0
 Identities = 634/634 (100%)
 Strand = Plus / Minus

                                                                        
Query: 68   gatactggaaatccaaacttaggaagtcatgcttgtatagcaaacactttactgattcag 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 gatactggaaatccaaacttaggaagtcatgcttgtatagcaaacactttactgattcag 1042

                                                                        
Query: 128  ccatctttcaagccctattctccaaaagttttgtaaaaaggcctatttgggtaggtgaca 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 ccatctttcaagccctattctccaaaagttttgtaaaaaggcctatttgggtaggtgaca 982

                                                                        
Query: 188  agtcttgggtcaaactttatagacagattaatgctattacctagagtccttgtagccaca 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981  agtcttgggtcaaactttatagacagattaatgctattacctagagtccttgtagccaca 922

                                                                        
Query: 248  aaattaatttttaaaaaaatctaacagcccagaagaaaaatattcttttctgccagagac 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921  aaattaatttttaaaaaaatctaacagcccagaagaaaaatattcttttctgccagagac 862

                                                                        
Query: 308  tcctacaaggattttttttctcatgaaaagaattctatgaaaagacacacagtgtcttta 367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861  tcctacaaggattttttttctcatgaaaagaattctatgaaaagacacacagtgtcttta 802

                                                                        
Query: 368  cctgaacacaggaacacagagcacaacagtacactctgtccccaacaaacacaggtcaga 427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801  cctgaacacaggaacacagagcacaacagtacactctgtccccaacaaacacaggtcaga 742

                                                                        
Query: 428  atacaggccagtacacatggctctcttgtggctaacacatggtggggggaggggtgtcac 487
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741  atacaggccagtacacatggctctcttgtggctaacacatggtggggggaggggtgtcac 682

                                                                        
Query: 488  attgtgtggcttgctggtgatggtctaatttggagtgggttgagactaccagagtagggg 547
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681  attgtgtggcttgctggtgatggtctaatttggagtgggttgagactaccagagtagggg 622

                                                                        
Query: 548  ttttcaaatggggtcctacttagtcaatggggaagtaatgactgataattagtctaaaac 607
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621  ttttcaaatggggtcctacttagtcaatggggaagtaatgactgataattagtctaaaac 562

                                                                        
Query: 608  tcagtacccttcctcccaggggcattgcccaaatcctactctatgttagtgcattagtta 667
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561  tcagtacccttcctcccaggggcattgcccaaatcctactctatgttagtgcattagtta 502

                                              
Query: 668  catttgagttatacctgagagaagcaacttttaa 701
            ||||||||||||||||||||||||||||||||||
Sbjct: 501  catttgagttatacctgagagaagcaacttttaa 468


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1101
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1091
Effective search space:   753881
Effective search space used:   753881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)