Query= MSMg01no536_c12.b1 MSMg01no536_c12.b1 CHROMAT_FILE:
MSMg01no536_c12.b1 PHD_FILE: MSMg01no536_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:11 2005
(625 letters)
>mm_chr2_67725198_67726222
Length = 1025
Score = 1062 bits (549), Expect = 0.0
Identities = 569/577 (98%), Gaps = 4/577 (0%)
Strand = Plus / Minus
Query: 16 ggaattccatacttctaaaagtctgcatctttaaaataattgataattatttgtgtgtat 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ggaattccatacttctaaaagtctgcatctttaaaataattgataattatttgtgtgtat 805
Query: 76 atgggtgccttacatccatgtatgtttacacattacaacatctatgtatgtttacacatt 135
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 804 atgggtaccttacatccatgtatgtttacacatt---acatctatgtatgtttacacatt 748
Query: 136 acagtacctgcagaggcccaaagagggcaccagatcccctgcccctagagtaacagagtt 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 acagtacctgcagaggcccaaagagggcaccagatcccctgcccctagagtaacagagtt 688
Query: 196 gtaagtaaccatgtggttgctgggaattaaacctgtgtcctctggaagggcagccagtgc 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gtaagtaaccatgtggttgctgggaattaaacctgtgtcctctggaagggcagccagtgc 628
Query: 256 tagtcatgtctttagctcttatcatttatgtctcaatgagaaatttagatttgtggaact 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tagtcatgtctttagctcttatcatttatgtctcaatgagaaatttagatttgtggaact 568
Query: 316 attagctgagtacaacatctttcccttaccgtagacagatcaatggagctaaaaagtgta 375
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 attagctgagcacaacatatttcccttaccgtagacagatcaatggagctaaaaagtgta 508
Query: 376 ttagcaaagcatgttggacttgaattatttgaacaggaaatcagaggccagaaaagtaat 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttagcaaagcatgttggacttgaattatttgaacaggaaatcagaggccagaaaagtaat 448
Query: 436 gtgtctaagtttaaacagttaatcaatggcaaggctggaactaggctcctctactggtgc 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gtgtctaagtttaaacagttaatcaatggcaaggctggaactaggctcctctactggtgc 388
Query: 496 tactttcttcttactgactctcaaaatgctattctagaaataccccggaagtacaagtaa 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tactttcttcttactgactctcaaaatgctattctagaaataccccggaagtacaagtaa 328
Query: 556 ggccttgtggggttttttttgtttttgtttttgtttt 592
|||||||||||| |||||| |||||||||||||||||
Sbjct: 327 ggccttgtgggggtttttt-gtttttgtttttgtttt 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_c12.g1 MSMg01no536_c12.g1 CHROMAT_FILE:
MSMg01no536_c12.g1 PHD_FILE: MSMg01no536_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:11 2005
(617 letters)
>mm_chr2_67578662_67579677
Length = 1016
Score = 1096 bits (567), Expect = 0.0
Identities = 603/615 (98%), Gaps = 1/615 (0%)
Strand = Plus / Plus
Query: 1 acacagtagtttgtattaaataataaaggaaatttaaacataaaatgtaaaaagtaaatt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 acacagtagtttgtattaaataataaaggaaatttaaaaataaaatgtaaaaagtaaatt 260
Query: 61 tcagaaaaaaagcagattcatgattagagcatatatattaaaataagtttttacttcaac 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 261 tcagaaaaaaagcagattcatgattagagcatatatattaaagtaagtttttatttcaac 320
Query: 121 aaattatttggaagcatctttagaacaacaatatgaaactcaaagcgatgtgtattttat 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 aaattatttggaagcatctttagaacaacaatatgaaactcaaagtgatgtgtattttat 380
Query: 181 aaagttagattagaaaagtttctgtgagagtcaggtatggtggtacacacttaataattg 240
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagttagattagaagattttctgtgagagtcaggtatggtggtacacacttaataattg 440
Query: 241 gactgtggacgtggaaggagttcgcatcattggccacacataccagcctagtttacattg 300
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 441 gactgtggacgtggaaggagttcacattattggccacacataccagcctagtttacattg 500
Query: 301 catcctgttgataaataaaaatgtcagaggaaagagaaatggctgcataagaaacaatga 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgtcctgttgataaataaaaatgtcagaggaaagagaaatggctgcataagaaacaatga 560
Query: 361 aattgaattcagcaagtattatatgtatttgtgcataaatatttatgcatgcatacattt 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 aattgaattcagcaagtattatatgtatttgtgcagaaatatttatgcatgcatacattt 620
Query: 421 ctacaacaataataataaaagaaaaattgactttcaagttaagaatgggagaggggttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctacaacaataataataaaagaaaaattgactttcaagttaagaatgggagaggggttca 680
Query: 481 agggagtttacttgggagagacttgtaagaggaaagttatataattctatttcaattaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agggagtttacttgggagagacttgtaagaggaaagttatataattctatttcaattaaa 740
Query: 541 atcatgtcaaactcctgcccaaaacaaaccagaattttttttactgtggcttaatatcat 600
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 741 atcatgtcaaactcctgcccaaaacaaaccagaattttttt-actatggcttaatatcat 799
Query: 601 caatgaaaaaacgat 615
|||||||||||||||
Sbjct: 800 caatgaaaaaacgat 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1016
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1006
Effective search space: 610642
Effective search space used: 610642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
