Query= MSMg01no536_p07.b1 MSMg01no536_p07.b1 CHROMAT_FILE:
MSMg01no536_p07.b1 PHD_FILE: MSMg01no536_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:12 2005
(406 letters)
>mm_chr2_172271110_172271910
Length = 801
Score = 692 bits (358), Expect = 0.0
Identities = 371/380 (97%), Gaps = 9/380 (2%)
Strand = Plus / Minus
Query: 1 tgtcaagccttttacccaataatcaatcaccacagcccctgaacgctgtttttaaaacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tgtcaagccttttacccaataatcaatcaccacagcccctgaacgctgtttttaaaacag 377
Query: 61 agctttctgtgttggctttagtaaatacattggagtgctccaaggcggtcagaaaacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agctttctgtgttggctttagtaaatacattggagtgctccaaggcggtcagaaaacaag 317
Query: 121 ctgctgagctgtttctttccttgcaccacgtgagccccagggaactccggttacaggtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctgctgagctgtttctttccttgcaccacgtgagccccagggaactccggttacaggtgc 257
Query: 181 ttcacccactgagccaagaaatcttgccagtgctgagttcagtccctaatgtatacagat 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ttcacccactgagcc-----atcttgccagtgctgagttcagtccctaatgtatacagat 202
Query: 241 tgtataaatatgcctagcctgggagtggcactatttggaggtgtgccattgttgcagtag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtataaatatgcctagcctgggagtggcactatttggaggtgtgccattgttgcagtag 142
Query: 301 gtgtggccttgttggagtaggtatgacactgtggg----cataggctttaatacccctgt 356
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 141 gtgtggccttgttggagtaggtatgacactgtgggcatacataggctttaatacccctgt 82
Query: 357 actagctgcctggaagccag 376
||||||||||||||||||||
Sbjct: 81 actagctgcctggaagccag 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 801
Length adjustment: 9
Effective length of query: 397
Effective length of database: 792
Effective search space: 314424
Effective search space used: 314424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_p07.g1 MSMg01no536_p07.g1 CHROMAT_FILE:
MSMg01no536_p07.g1 PHD_FILE: MSMg01no536_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:12 2005
(521 letters)
>mm_chr2_172110787_172111707
Length = 921
Score = 953 bits (493), Expect = 0.0
Identities = 514/521 (98%)
Strand = Plus / Plus
Query: 1 catgagttcaaagccggatttggatgcataccgggtacgaggccagctggagttacagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgagttcaaagccggatttggatgcataccgggtacgaggccagctggagttacagag 260
Query: 61 caagaccctgttgaaaaaattaaataaataaataaaaataaaaaaactagacagattttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagaccctgttgaaaaaattaaataaataaataaaaataaaaaaactagacagattttt 320
Query: 121 tttaatggacatggacttcttaaaatgaaaaactagagtcatttcttccattagtcagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaatggacatggacttcttaaaatgaaaaactagagtcatttcttccattagtcagtg 380
Query: 181 tatgttggcttatcccacaaaaaggattctaaattctcattccatcctctaacaatccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatgttggcttatcccacaaaaaggattctaaattctcattccatcctctaacaatccaa 440
Query: 241 agtctactgcaatccagggcaccctcgccagtccaatggcagtctctggggactcagaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtctactgcaatccagggcaccctcgccagtccaatggcagtctctggggactcagaat 500
Query: 301 tccaggctgcagcaaccagatgcccccacagagagactctatcactagcgatcaaatgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccaggctgcagcaaccagatgcccccacagagagactctatcactagcgatcaaatgtt 560
Query: 361 tctgtctccacctgaaaaccaagactctcacgcatgactcattggcaacaacaacaaaaa 420
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 561 tctgtctccacctgaaaaccaagactgtcacgcatgactcaatggcaacaacaacaaaaa 620
Query: 421 agtgaccatttgtgctttgcagagcacaaagcactgtaacgttttgtgtatccagcgacg 480
||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| |||
Sbjct: 621 agtgaccatttgtgcattgcagagcacaaagcactgtaacgctctgtgtatccagcaacg 680
Query: 481 gaggaggaccagatatcaatgagcagaaataccgggcctct 521
|||||||||||||||||||||||||||||||| ||||||||
Sbjct: 681 gaggaggaccagatatcaatgagcagaaatacggggcctct 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
