Query= MSMg01no537_a16.b1 MSMg01no537_a16.b1 CHROMAT_FILE:
MSMg01no537_a16.b1 PHD_FILE: MSMg01no537_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:19 2005
(594 letters)
>mm_chr2_64670425_64671417
Length = 993
Score = 1104 bits (571), Expect = 0.0
Identities = 586/591 (99%), Gaps = 1/591 (0%)
Strand = Plus / Minus
Query: 4 ggaattccttcatggtatgtacacactggttctgccagctctgcatatcatgtagtctta 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ggaattccttcatgg-atgtacacactggttctgccagctctgcatatcatgtagtctta 735
Query: 64 acaatgctttggttcttagaagctttgctctcataaacatttactttccaggaccaaact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 acaatgctttggttcttagaagctttgctctcataaacatttactttccaggaccaaact 675
Query: 124 ctactctggttatttgttacaaaagaaatcattccaaaactcagaagcttaagactgtaa 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctactccggttatttgttacaaaagaaatcattccaaaactcagaagcttaagactgtaa 615
Query: 184 gtgatttactcaagatcttgtatgggcttagctggactgtacttctctatataacactga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gtgatttactcaagatcttgtatgggcttagctggactgtacttctctatataacactga 555
Query: 244 acaatgcaatttgatagtgaatgaaatggatgggagggttaagatacttcatgcacacat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 acaatgcaatttgatagtgaatgaaatggatgggagggttaagatacttcatgcacacat 495
Query: 304 ctggtgcctaagcagaggtggctcactggcctgctccttcttaacgccttgaatatatta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ctggtgcctaagcagaggtggctcactggcctgctccttcttaacgccttgaatatatta 435
Query: 364 cctatatgttagcttccaggtctcagagttgaagaaactgatctgggaccatttccaata 423
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 434 cctatatgttagcttccaggtctcagagttgaagaaattgatctgggaccatttccaata 375
Query: 424 tatcctaatagaatagcccaggtttatccagatccaaggtagtgaatgtaggagtacttc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tatcctaatagaatagcccaggtttatccagatccaaggtagtgaatgtaggagtacttc 315
Query: 484 atggagaggatcaagaaaggaattgttggtctacttctcagcaaactgaagcaaactacc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atggagaggatcaagaaaggaattgttggtctacttctcagcaaactgaagcaaactacc 255
Query: 544 tcctatccatcaacagaatcgtcttgcagtaaatggaaacatttctaagcc 594
||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 254 tcctatccatcaacagaattgtcttgcagtaaatggaagcatttctaagcc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 993
Length adjustment: 10
Effective length of query: 584
Effective length of database: 983
Effective search space: 574072
Effective search space used: 574072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_a16.g1 MSMg01no537_a16.g1 CHROMAT_FILE:
MSMg01no537_a16.g1 PHD_FILE: MSMg01no537_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:19 2005
(587 letters)
>mm_chr2_64523266_64524252
Length = 987
Score = 1118 bits (578), Expect = 0.0
Identities = 584/586 (99%)
Strand = Plus / Plus
Query: 1 agtaatgtcaggaaaaatacaatcttctaagagtttaattatgtggctattttagtgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtaatgtcaggaaaaatacaatcttctaagagtttaattatgtggctattttagtgtga 260
Query: 61 ctgaagaaggaggataagaacaccattttctgtcttcatgaggtgatgatccaatgcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaagaaggaggataagaacaccattttctgtcttcatgaggtgatgatccaatgcaga 320
Query: 121 ctggaggaaattataagaggttccactcatttaaatatacatttttatatttattaccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggaggaaattataagaggttccactcatttaaatatacatttttatatttattaccta 380
Query: 181 tatgtaaaatattatcagaagaacctaagtagtttgatgtagtatcacaaagaactaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 tatgtaaaatattatcagaagaacctaagtagtttgatgtagtatcataaagaactaaaa 440
Query: 241 gcctaaactaataaaaaatttcaagctctgtattttaaattctggttgtagctatctttt 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcctaaactaataaaaaaattcaagctctgtattttaaattctggttgtagctatctttt 500
Query: 301 ttcaagttataaacaagatctaaaatcataaaatagaaccaggaagaaaatgattttcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcaagttataaacaagatctaaaatcataaaatagaaccaggaagaaaatgattttcaa 560
Query: 361 catttctgatgatggaaaaaaaatacaatgacttgtgtgaagaagtgacctttattggcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catttctgatgatggaaaaaaaatacaatgacttgtgtgaagaagtgacctttattggcc 620
Query: 421 aaggtaatctaaatatatttcctacacatttgtgagtattctacaagaaagcaaattatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaggtaatctaaatatatttcctacacatttgtgagtattctacaagaaagcaaattatg 680
Query: 481 tgagataaaattgttcaggataaaaaagttaaatgagacaaaatgtcacttgatttaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgagataaaattgttcaggataaaaaagttaaatgagacaaaatgtcacttgatttaaaa 740
Query: 541 tgtaatgctgcagcaataaattagtgcagtgtagcctgctataaaa 586
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtaatgctgcagcaataaattagtgcagtgtagcctgctataaaa 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
