Query= MSMg01no537_n22.b1 MSMg01no537_n22.b1 CHROMAT_FILE:
MSMg01no537_n22.b1 PHD_FILE: MSMg01no537_n22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:21 2005
(391 letters)
>mm_chr2_52837958_52838749
Length = 792
Score = 719 bits (372), Expect = 0.0
Identities = 384/388 (98%), Gaps = 1/388 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgtgtccatcactaaaactcacaaagaaccacagtatatataacaacagccaa 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgtgtccaaaactaaaactcacaaagaaccacagtatatataacaacagccaa 264
Query: 65 acagtgctattttcctggaatccctgagggccttcaggagacctggggacttcagttata 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 acagtgctattttcctggaatccctgggggccttcaggagacctggggacttcagttata 324
Query: 125 ttgctccaagttttgctagaaaaaaaa-gaaagatcataaaacattcaggtgtcagggtt 183
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 ttgctccaagttttgctagaaaaaaaaagaaagatcataaaacattcaggtgtcagggtt 384
Query: 184 ttgtttgtagtacagtggaaacgggttgtgtacttgacagtcatgtgttgtgaatgttgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgtttgtagtacagtggaaacgggttgtgtacttgacagtcatgtgttgtgaatgttgg 444
Query: 244 ttgcctgccaacgtctgttatatcaggactgatctgaaagctaaattacaggaaagtaac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgcctgccaacgtctgttatatcaggactgatctgaaagctaaattacaggaaagtaac 504
Query: 304 cacctgccctgcattcaggaacagagcattgtattgtcaaagatgtggtttactaaaaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cacctgccctgcattcaggaacagagcattgtattgtcaaagatgtggtttactaaaaga 564
Query: 364 gtttgtaagaactagtgaatgcaaaaac 391
||||||||||||||||||||||||||||
Sbjct: 565 gtttgtaagaactagtgaatgcaaaaac 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 792
Length adjustment: 9
Effective length of query: 382
Effective length of database: 783
Effective search space: 299106
Effective search space used: 299106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_n22.g1 MSMg01no537_n22.g1 CHROMAT_FILE:
MSMg01no537_n22.g1 PHD_FILE: MSMg01no537_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:22 2005
(604 letters)
>mm_chr2_52998319_52999322
Length = 1004
Score = 862 bits (446), Expect = 0.0
Identities = 461/466 (98%), Gaps = 1/466 (0%)
Strand = Plus / Minus
Query: 139 tccttgcctgatttaggaggaaatgcttcttgggatgaaataaaaagaaatgtctgagcc 198
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 tccttacctgatttaggaggaaatgcttcttgggatgaaataaaaagaaatgtctgagcc 945
Query: 199 gggcgtggtggctcacgtctttaatcccagcactcgggaggcagaggcaggcggatttct 258
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 944 gggcgtggtggctcacgtctttaatcccagcacttgggaggcagaggcaggtggatttct 885
Query: 259 gagttcgaggccagcctggtctacaaagtgagctccaggacagtcagagctataaagaga 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gagttcgaggccagcctggtctacaaagtgagctccaggacagtcagagctataaagaga 825
Query: 319 aactgtctcgaaaaaccaaaaaaaaaaaaaaaagaaagaaatgtctggtaccacttcata 378
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 aactgtctcgaaaaacc-aaaaaaaaaaaaaaagaaagaaatgtctggtaccacttcata 766
Query: 379 aatgactatccggttgattctcttacatttatattccttaaaaatttttaacagcaaatt 438
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 765 aatgactatccggttgattctcttacatttatattccttaaaaaattttaacagcaaatt 706
Query: 439 aacagtacaaaatagttgtcatttaacttggaatgaaaagataatgtttgaattttacag 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aacagtacaaaatagttgtcatttaacttggaatgaaaagataatgtttgaattttacag 646
Query: 499 taccactgagaagtacattgggcactgacaccttgattttcaaattattggggttttgtt 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 taccactgagaagtacattgggcactgacaccttgattttcaaattattggggttttgtt 586
Query: 559 ctggttttgagacaggttttctctgattcacgacctccatgaagag 604
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ctggttttgagacaggttttctctgattcacgacctccatgaagag 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
