Query= MSMg01no538_g13.b1 MSMg01no538_g13.b1 CHROMAT_FILE:
MSMg01no538_g13.b1 PHD_FILE: MSMg01no538_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:03 2005
(233 letters)
>mm_chr2_97186621_97187253
Length = 633
Score = 400 bits (207), Expect = e-116
Identities = 225/231 (97%), Gaps = 1/231 (0%)
Strand = Plus / Minus
Query: 4 ggaattcccaattacgataatgtccaatagccatgagacaattctaggcatcattcatct 63
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 355 ggaattcccaattaagataatgtccaataaccatgagacaattctaggcatcattcatct 296
Query: 64 aggattctgggagttttaaaaataggatgactatgagaaaaataaaagtaaatatgaaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aggattctgggagttttaaaaataggatgactatgagaaaaataaaagtaaatatgaaat 236
Query: 124 atacccttgtcacatcccagtagcctatatggcaaacacatctct-tctctctctctctc 182
|||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 235 atacccttgtcacatcccaggagcctatatggtgaacacatctctctctctctctctctc 176
Query: 183 tctctctctctctctctctctctctctctctctctctctctctctctctct 233
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tctctctctctctctctctctctctctctctctctctctctctctctctct 125
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 121
Number of extensions: 44
Number of successful extensions: 44
Number of sequences better than 10.0: 1
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no538_g13.g1 MSMg01no538_g13.g1 CHROMAT_FILE:
MSMg01no538_g13.g1 PHD_FILE: MSMg01no538_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:03 2005
(480 letters)
>mm_chr2_97040701_97041580
Length = 880
Score = 872 bits (451), Expect = 0.0
Identities = 472/479 (98%)
Strand = Plus / Plus
Query: 1 ctccctatatgactgatgcatcaccaggccctggacttggccaaagttgtacacacttct 60
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ctccctatatgactgatgcataaccaggccctggacttggtcaaagttgtacacacttct 260
Query: 61 aatggtctaagcagctcctttccccctattaaaagctttctcactgaagctgtgttctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatggtctaagcagctcctttccccctattaaaagctttctcactgaagctgtgttctaa 320
Query: 121 gagtatattctcatcttgtgctcacagctgcctgagatctcttctatatttcttggccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtatattctcatcttgtgctcacagctgcctgagatctcttctatatttcttggccac 380
Query: 181 ccccaaagttttggccttactttccctctcaggatcctccagtcaaaaccaggccaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccccaaagttttggccttactttccctctcaggatcctccagtcaaaaccaggccaattg 440
Query: 241 ggctttgataggtgggaagtggggccatgactcaaagtgcattctattttttcttttttt 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggctttgataggtgggaattggggccatgactcaaagtgcattctattttttcttttttt 500
Query: 301 aaaatgctcttgtctggggatatattactagtttatgaattgcagattctatgctatatt 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaatgctcttgtttggggatatattactagtttatgaattgcagattctatgctatatt 560
Query: 361 cacaggactgttggtttcttcggtttaccagctgattgcctttgtgtggtccagttttga 420
||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct: 561 cacaggactgttggtttcttcggttaacaagctgattgcctttgtgtggtcaagttttga 620
Query: 421 tataataaaactaatacactggataaaacaatttaacagagaaaggctttgtgatctta 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tataataaaactaatacactggataaaacaatttaacagagaaaggctttgtgatctta 679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
