GCGGCGCTXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTTGT
CTTCTGAGTATGCAGAGCCCAGCACTGGGGCCAGCATGGACCAGGCATCC
ATGTTAACTACTGTTCTCACCCCTGGGCTCTCTGTAGTTTAAGGAGGAAG
CATTTATTTTGGCTCCACAGTTTGAAAAGGTATAGCCCATCATGCCGAGG
AAGCCACAGAAGCCCTTCAAAGTTGCTGGGTCCATGCTGGCAAGAACTTG
CTTGCCTCTGCTTGCTTAAACCTCGGTGGATCAGGAGTGGGGTGGGGAGC
AGAAGTGTGTGCAGGCTAAACCTGGGCAAGGCTACCAATAGATAACTCCT
GGGCCTCCACTAAAAGTTCTACAGCCTCCTGACAAGACAGGACCACACAC
CAAGGAGCAGATGTTCAAGTTCACAACCCTGCAGAGGAAATTTCACATTC
AAACAATATCAACCATGGTATCTTTGTTTTTTAATTTTTTAAAATTTTAT
GTCATTTTTGTTTCTTTGAGACAGGGTTTCTCTGTATAACTCTGGCTGTC
CTGGGACTCGATTTATAGACCAGGCTGGCCTATAACTCAGAGATCCAGTC
TGCCTTTGCCTTCCTGGTGCTGGGATTAAAGGCATGTGGCACCACTGCCC
AGTTATCAGTGGTATCTTCTAAAATGTGTGGAGGATTCACTCTCAATGTC
CACTTTCTCACACCAACCTCCCTTCTAGGAATGATTCACCAGCTCATG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCTGGCTAGAGATTTGTTTGTAGGTTGAGGTGAAATTG
CAAAACATAAAGTGAACCATTTGCAAGAGCGTACATTTCAGTGACATTTA
GTACTTCCTAGTACAGAGCAGCTATCCTCTGTAAAGACTCAAACATTTTC
ATCACTGCAGAGGGGAACCCCATCCCTGTTAGGCAGTCACTCCCTGTGCC
CTCACCCTCTCTGCTCCTGGGAACCACTAATATGCTTTCTGTCTGGACAG
TGCTTCTCCTGGGGATTTTACATACTCGTGTCTCTTCTTTCAGTTAGGTA
ATAATTTGAGGTTTATCCACAAAGTTCCATGTACTAGTACTGTGTTTCTA
CTGAGGATAAATATTAGTGCAAATATTGATAATTATTGCAATAGTAGTAG
CTAGTACCTGTTATATGGATCTGCCACAATGTGTTCATTATTATTGAATG
GCATTTGAGTCACATCTACTTTTTGGTTACAGTGAACAATGAATAATGCT
TCTGTAGATAGTCACATAACAAGTTTTTGTAGACATGTTTTCATTTCTCT
TGGGTATGTGTTATACTAGGGTTGGGATTGCCAGATCAAATTGCAATAGT
GATTCTGTATTTAACCTTTTGACACTCACAGGCCAAACGGTTGCCCATGA
TGGCTGCTTAGTTTCTGCTTCAGGTCTTCACATTCCTGCCAATACTTACC
ACN

Query= MSMg01no538_o15.b1 MSMg01no538_o15.b1 CHROMAT_FILE:
MSMg01no538_o15.b1 PHD_FILE: MSMg01no538_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:41 2005
         (714 letters)



>mm_chr2_157929898_157931011
          Length = 1114

 Score = 1257 bits (650), Expect = 0.0
 Identities = 695/710 (97%), Gaps = 1/710 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcttgtcttctgagtatgcagagcccagcactggggccagcatggaccaggcat 64
           |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 gaatcctcttgccttctgagtatgcagagcccagcactggggccagcatggaccaggcat 774

                                                                       
Query: 65  ccatgttaactactgttctcacccctgggctctctgtagtttaaggaggaagcatttatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 773 ccatgttaactactgttctcacccctgggctctctgtagtttaaggaggaagcttttatt 714

                                                                       
Query: 125 ttggctccacagtttgaaaaggtatagcccatcatgccgaggaagccacagaagcccttc 184
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 713 ttggctccacagtttgaaaaggtacagcccatcatgccgaggaagccacagaagcccttc 654

                                                                       
Query: 185 aaagttgctgggtccatgctggcaagaacttgcttgcctctgcttgcttaaacctcggtg 244
           |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 653 aaagatgctgggtccatgctggcaagaacttgcttggctctgcttgcttaaacctcggtg 594

                                                                       
Query: 245 gatcaggagtggggtggggagcagaagtgtgtgcaggctaaacctgggcaaggctaccaa 304
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 593 gatcaggagtggggtggggagcggaagtgtgtgcaggctaaacctgggcaaggctaccga 534

                                                                       
Query: 305 tagataactcctgggcctccactaaaagttctacagcctcctgacaagacaggaccacac 364
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tagataactcctgggcctccattaaaagttctacagcctcctgacaagacaggaccacac 474

                                                                       
Query: 365 accaaggagcagatgttcaagttcacaaccctgcagaggaaatttcacattcaaacaata 424
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gccaaggagcagatgttcaagttcacaaccctgcagaggaaatttcacattcaaacaata 414

                                                                       
Query: 425 tcaaccatggtatctttgttttttaattttttaaaattttatgtcatttttgtttctttg 484
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 413 tcaaccatggtatctttgttttttaattttttaaa-ttttatgtcatttttgtttctttg 355

                                                                       
Query: 485 agacagggtttctctgtataactctggctgtcctgggactcgatttatagaccaggctgg 544
           ||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 354 agacaaggtttctctgtataaccctggctgtcctgggactcgatttatagagcaggctgg 295

                                                                       
Query: 545 cctataactcagagatccagtctgcctttgccttcctggtgctgggattaaaggcatgtg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 cctataactcagagatccagtctgcctttgccttcctggtgctgggattaaaggcatgtg 235

                                                                       
Query: 605 gcaccactgcccagttatcagtggtatcttctaaaatgtgtggaggattcactctcaatg 664
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 234 gcaccactgcccagttatcagtggtatcttttaaaatgtgtggaggattcactctcaatg 175

                                                             
Query: 665 tccactttctcacaccaacctcccttctaggaatgattcaccagctcatg 714
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tccactttctcacaccaacctcccttctaggaatgattcaccagctcatg 125


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 714
Length of database: 1114
Length adjustment: 10
Effective length of query: 704
Effective length of database: 1104
Effective search space:   777216
Effective search space used:   777216
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)