Query= MSMg01no540_i12.b1 MSMg01no540_i12.b1 CHROMAT_FILE:
MSMg01no540_i12.b1 PHD_FILE: MSMg01no540_i12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:50 2005
(634 letters)
>mm_chr2_144811193_144812226
Length = 1034
Score = 1187 bits (614), Expect = 0.0
Identities = 626/630 (99%)
Strand = Plus / Plus
Query: 5 gctacagacttgggttctttcttcatatgtttcaaaactcatccacatggctagctggga 64
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 205 gctacagacttgggttctttcttcatatgtttcaaaactcatccagatggctagctggga 264
Query: 65 atggcacgtggctttctcaggccaggaagctggtcttgttaagtctctcatgtctagatg 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 atggcacgtggctttctcaggccagggagctggtcttgttaagtctctcatgtctagatg 324
Query: 125 gggctggtggtgtgtgtcagtactgggctacatctccaaagggtcctgctgcagacagtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggctggtggtgtgtgtcagtactgggctacatctccaaagggtcctgctgcagacagtg 384
Query: 185 cttcttcaaggaagatgatgtgatctacattggtggggtgataccaggcagacacaattg 244
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 385 cttcttcaaggaagatgatctgatctacattggtggggtgatgccaggcagacacaattg 444
Query: 245 gtacctgttcataaccccatagtcttcaccattttagcataggtgtggaatcattgcaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtacctgttcataaccccatagtcttcaccattttagcataggtgtggaatcattgcaaa 504
Query: 305 cgctgccttcttctccttgatatgagtatgactttcacataacaggcaaggtggaacttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cgctgccttcttctccttgatatgagtatgactttcacataacaggcaaggtggaacttg 564
Query: 365 gagatcacttgtaatgttttgtccctcgtatgttcacatacaagatccctattgaccaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagatcacttgtaatgttttgtccctcgtatgttcacatacaagatccctattgaccaca 624
Query: 425 gtgttaactgacttaataacatgtgtatttacacccttctgttttcaccctcacttctct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtgttaactgacttaataacatgtgtatttacacccttctgttttcaccctcacttctct 684
Query: 485 gatgttccatgtacttatcaggagcatgtatgggatcatctcctaagtaaattacttgct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gatgttccatgtacttatcaggagcatgtatgggatcatctcctaagtaaattacttgct 744
Query: 545 ctaaaaccttcatctgtgttggcttctggggtaccagatacagataatgtcttccaagtc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctaaaaccttcatctgtgttggcttctggggtaccagatacagataatgtcttccaagtc 804
Query: 605 tctcagctatgtgtcaactacccaagactt 634
||||||||||||||||||||||||||||||
Sbjct: 805 tctcagctatgtgtcaactacccaagactt 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no540_i12.g1 MSMg01no540_i12.g1 CHROMAT_FILE:
MSMg01no540_i12.g1 PHD_FILE: MSMg01no540_i12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:50 2005
(643 letters)
>mm_chr2_144995880_144996922
Length = 1043
Score = 1222 bits (632), Expect = 0.0
Identities = 641/644 (99%), Gaps = 2/644 (0%)
Strand = Plus / Minus
Query: 1 tcctcattccagcactaactcttcctgacctaaattaaacaatcctcatgtcctagctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 tcctcattccagcactaactcttcctgacctaaattaaacaatcctcatgtcctagctac 784
Query: 61 acagaaagagaaaacaaaaacagtatagattcttttctatacttctaaccaaatacagag 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 acagaaggagaaaacaaaaacagtatagattcttttctatacttctaaccaaatacagag 724
Query: 121 ctttgcaaaacagaagcaaactttttagtatataaccaaatctggatttacttagaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ctttgcaaaacagaagcaaactttttagtatataaccaaatctggatttacttagaaatt 664
Query: 181 aagaaagagatcctaaattccatgattagaaatgttagacattatgtaacataactgcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aagaaagagatcctaaattccatgattagaaatgttagacattatgtaacataactgcca 604
Query: 241 tacacctctatttggactttcttataaaaagaactaaccaccctttttataagaaagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tacacctctatttggactttcttataaaaagaactaaccaccctttttataagaaagaaa 544
Query: 301 aagaacaaggtgggggtgggaatcatgggaaacaagcctctgagaagatatctggttatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aagaacaaggtgggggtgggaatcatgggaaacaagcctctgagaagatatctggttatc 484
Query: 361 tttaataattaccacatgcctttaaacataaaaattacctttggttattaggaaggta-c 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 483 tttaataattaccacatgcctttaaacataaaaattacctttggttattaggaaggtacc 424
Query: 420 ccccccatgaccatatgaacaccacagtcttgcaccctgaagcaagaaacagagctgaga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ccccccatgaccatatgaacaccacagtcttgcaccctgaagcaagaaacagagctgaga 364
Query: 480 acaaaggtcacctaaggttggtttatacctccacacctcacttcctatatgacttcactc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acaaaggtcacctaaggttggtttatacctccacacctcacttcctatatgacttcactc 304
Query: 540 agtcaccttttgtgagtcccagtatctttaaaatgaggtgaattttgaaccctttgccaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agtcaccttttgtgagtcccagtatctttaaaatgaggtgaattttgaaccctttgccaa 244
Query: 600 tgacacaaggatagtatgtagaatgcccccccccccaaatttca 643
||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 243 tgacacaaggatagtatgtagaatg-ccccccccccaaatttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
