NNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCTTAGAAGATCAGAAGGAACTACTGTAGATATCAGAGGGTAT
AAAAAAATTAGGATAAGATGGCCTACCAAATCAACTAAGCAGGGCTCACA
TGGGTTCACAGAAACAGAAGCAGAAAGCACCAGGGCTGCCTGGGTCTGTA
CGAGGTCTCTGCATATATATGCATATATATATATATATATATATATATAT
ATATATATATATATATATATATATATATATATATATATATATATATATAT
ATATATATATATATATATATATATATATATATATATATATATATATATAT
ATATATATATATATATATATAGAGAGTGTGTGTGAGTGTGTGTGTGTGTG
TGTGTGAGTGTGTGTGTGTGAGAGTGTGTGAGAGAGAGAGAGATATAGAG
AGATACATAGAGAGATACAGAGAGAGAGAGAGAGAGAGCGAGAGAGAGAG
AGAGAGAGAGAGGGCGGGAGAGATATAGGGGGAGTAAGAGGNNANAGTGA
AAAAAAGAGAGAGAGANAGANANANACANNANNNNNANNNNNNNTNTNTN
TNCNNNNNNNNNNTNTNNNNNTNTNNNNNCGCCCCNNTCTCCCCCTCTCC
NNNCCGGCCTATGGTGACGTGGGAACGTGGGCCCTTTTTTTTNTTTTTTT
CCCGATTAACACCTCCTGAAAAATTTACAAATTTTTGCTGGTTGTTAAAG
GAAGGTAAAAAATATACAAACCGCCA

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATTCCTTGCAATTGGAAGAAATTCT
TCTTCATTTCTTTGTTGGCTCTTTCCCATGGAACATCCTCCTAAAGGCTG
CTCTTGATTCCCTGATACATGGTTCACTTGCCTTAAGTTCATATCAATAT
TCTTTCATGTAAATAGCAATAATTTCCTTCATTTCCTGTCTGGTTTCTTT
GGAGAATTGGTTTGCCTTAGGTTAGTCTCATCCAGAGCAATCTCCCTTTT
GAATAAACTCAAAGTCATCTGATTAAGAAAATTAATTACAATTAAAATCT
ATCTTCTGCCTAATAACATAAAATAATTATAAGAAGCACAGAAAACAAGG
TTAATAAGTCCCACTCACACACTAGAGGACGAGAATATACTGGAAATGTT
CAAGATATGTAGGGATCTTAGAGATCGTCTTGAAGTTTTTCTGTCATATT
TATATTGTCCTCTATACTGACTAAATGCATAAATCTTTGCTAGAGAGTTC
TGTTGTACAATATAACATGTAAGGATTTTAAGGGATGGTGATTTTAGTGG
TGTTAGTCACAACTGTAGTTGTTACTATTTCATTTGAAACAGTTTTTTTT
TATTTAAATATTTTTTATTACTTATATTCCTCAATTATATTTTCAATGCT
ATCCCAAAAGTTCCCCATACGCTCCCACCAACCCACTCCCCTAAACACCA
TTCCCACTTTTTGGCN

Query= MSMg01no541_c22.g1 MSMg01no541_c22.g1 CHROMAT_FILE:
MSMg01no541_c22.g1 PHD_FILE: MSMg01no541_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:44 2005
         (664 letters)



>mm_chr2_95620493_95621556
          Length = 1064

 Score =  942 bits (487), Expect = 0.0
 Identities = 532/547 (97%), Gaps = 3/547 (0%)
 Strand = Plus / Minus

                                                                        
Query: 119  tcaatattctttcatgtaaatagcaataatttccttcatttcctgtctggtttctttgga 178
            ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1064 tcaatcttctttcatgtaaatatcaataatttccttcatttcctgtctggtttctttgga 1005

                                                                        
Query: 179  gaattggtttgccttaggttagtctcatccagagcaatctcccttttgaataaactcaaa 238
            |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||
Sbjct: 1004 gaattggtttgccttaggttcgtctcatccagagcaatctaccttttgaataaattcaaa 945

                                                                        
Query: 239  gtcatctgattaagaaaattaattacaattaaaatctatcttctgcctaataacataaaa 298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944  gtcatctgattaagaaaattaattacaattaaaatctatcttctgcctaataacataaaa 885

                                                                        
Query: 299  taattataagaagcacagaaaacaaggttaataagtcccactcacacactagaggacgag 358
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 884  taattataagaagcacagaaaacaaggttaataagtcccactcacacactagaggatgag 825

                                                                        
Query: 359  aatatactggaaatgttcaagatatgtagggatcttagagatcgtcttgaagtttttctg 418
            ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 824  aatatactggaaatgttcaagatgtgtagggatcttagagatcgtcttaaagtttttctg 765

                                                                        
Query: 419  tcatatttatattgtcctctatactgactaaatgcataaatctttgctagagagttctgt 478
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 764  tcatatttatattgtcctctatactgactaaatgcataaatctttgctagagagttgtgt 705

                                                                        
Query: 479  tgtacaatataacatgta-aggattttaagggatggtgattttagtggtgttagtcacaa 537
            |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 704  tgtacaatataacatg-acaggattttaagggatggtgattttagtggtgttagtcacaa 646

                                                                        
Query: 538  ctgtagttgttactatttcatttgaaacagtttttttttatttaaatattttttattact 597
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 645  ctgtagttgttactatttcatttgaaacag-ttttttttatttaaatattttttattact 587

                                                                        
Query: 598  tatattcctcaattatattttcaatgctatcccaaaagttccccatacgctcccaccaac 657
            |||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||
Sbjct: 586  tatattcctcaattatatttccaatgctatcccaaaagtcccccatacactcccaccaac 527

                   
Query: 658  ccactcc 664
            |||||||
Sbjct: 526  ccactcc 520


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)