TTGCTATGTTCCTTTNCCCCCGTTCTTTTGCTAAAGAAAGGAATTACACA
ACCCCAACCCATCAAGCAAAAGTCCACATCATAACAATATCACGACAAGC
GGTACTTTTACACTGGTACATTTTTAGCGTTCGACATTCCCACCAATTCC
GCTTTTCCTATTTTTACTAGACTCCCCAATTCTACTCTTTATTCTTATTA
TTGTAATTTACTACGCGCATAACTCGATTATATGATAAGGGGAGTCCCCT
CCTTTAAAGACAAAAAAATCTGGAGCGGGGGGGCCACGGGCCGTTTAAAA
ATACCGGGAAAACCTTCCCCACCCTAAATTAAGGTGTTGTCCTCCGCCAA
GGGAAAAAATCCCGCGGGGCCGGGCGGGAAAAAAATTTTTTCCAAATAAG
GGGGGGAGTGTGGGCGGCCCCCAAAAAAAAGAGGTTTTTTTTCTTCCCCC
CCGCCCCCCCCCAAAGAGACCCCCAAAGTGCCCCCCCCAAGGGCCCCCCA
CAAAGGGCGCCCCCCACAAATTTCCCTTTTTTTTTTTCCCCCAACCGGGG
GGTTTTCCCCCCCCAAATTTTCCAAAAGGAGAATGTTTGTNGGGCCCCCC
CCAAGGGGAAAAACCCAAAGAGGCCCCCCAAAAAGAGGGGGGGGGGAAAT
AAAAAAAAGAAGGGGGGGGGGGGTAAAAAAAACAAAAAAAAGGGGGGGGG
GGGGGGGGGGGGGGGGCACCCCTTGTGGGGGGCGCCCCCCTTGGGGGGGG
GGGAAAAAAACAACCGGGGCGCCCCCGACGGGGGAAAAAATATTTATAAT
AACCCCNCCCCTCCCGGGGGGGCGGGGGTAACAAAAAAAAAAACCCCCCC
CCCCCCCACAAAATTTTTTNTTTTTATAAAAAAAAAAGGGGGTGTTGTTG
TTCTTCTCCCGCCCCACCCCGNCTTTTTAATTTTTCNTCTGNGGGGGTGC
GGTGCCCCCCCCCACAAAAAAAAAAAATTTTTTTTAAAAAAAATACGGGG
GGGGGGGGGGGGGCGGCCACCCCACCTCTTTG

CATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTTTCCGAATTCCTACAACAATTAGCAGATAAATATTCCT
GCGATTTCATATAACTGAACATAGGGAATTTGGTGGGCGCAGGCCTGGTC
TTGCCTTCTGCATCTGCTACGATCACCCTTCAGTGAACACTCAGTGTTGG
ACTCCATCTTTAGGGTCTCAGAAGGTTTCATGCTGATGAAATTGTGATTC
TGGATACCCACCAACAAAGTGTTAACAGCTCGATCCCTGGCACTCTTGGG
AGGGTGGGCTGGTTGGAGGCCTCCATCACTGGGACCGTTAGAGGGGATCA
TGGCTTCCCTTCTCTCAATCCACAGCCACAAGATGAAGAGCTTTGTCCCA
TGGAGAGCTTTGCCCGTGACTCTCCACCATTGACTCAAAGCAGCTGGGTC
AACCCATCATGAGTGAAACTTTCACAGCTCAGCAGAAAGAACATTCAGTA
CTGTCAATATTTTCACAGTGACGGGAGGCTGAAGGAAAACATAAACACAT
TTCTTCATGTATAACTCAGGCCATATGCCATGTCACACACGGGACTCAAA
CTTCAGCCCTTCCCATAATATCCTCAGTATTTTGGTGGCATTCACAAATT
ATTATCCTATAGTATTCTCGCTCTGTGTTTTAATAATTGACTTGTATTAT
TTTTTAATTATATGTGTGAGTGTATGCCTGTGTGGGGGTCTCCTAAGGGG
AAAAGAGG

Query= MSMg01no542_e12.g1 MSMg01no542_e12.g1 CHROMAT_FILE:
MSMg01no542_e12.g1 PHD_FILE: MSMg01no542_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:16 2005
         (685 letters)



>mm_chr2_169408666_169409752
          Length = 1087

 Score = 1218 bits (630), Expect = 0.0
 Identities = 667/682 (97%), Gaps = 6/682 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcctacaacaattagcagataaatattcctgcgatttcatataactgaacataggg 65
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 206 gaattcctacaacaattagcagataaatattcctgcgttttcatataactgaacataggg 265

                                                                       
Query: 66  aatttggtgggcgcaggcctggtcttgccttctgcatctgctacgatcacccttcagtga 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aatttggtgggcgcaggcctggtcttgccttctgcatctgctacgatcacccttcagtga 325

                                                                       
Query: 126 acactcagtgttggactccatctttagggtctcagaaggtttcatgctgatgaaattgtg 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acactcagtgttggactccatctttagggtctcagaaggtttcatgctgatgaaattgtg 385

                                                                       
Query: 186 attctggatacccaccaacaaagtgttaacagctcgatccctggcactcttgggagggtg 245
           |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 386 attctggatacccaccaacaaagtgttaacagctggatccctggcactcttggaagggtg 445

                                                                       
Query: 246 ggctggttggaggcctccatcactgggaccgttagaggggatcatggcttcccttctctc 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggctggttggaggcctccatcactgggaccgttagaggggatcatggcttcccttctctc 505

                                                                       
Query: 306 aatccacagccacaagatgaagagctttgtcccatggagagctttgcccgtgactctcca 365
           ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 506 aatccacagccacaagatgaagagctttgtcccatcgagagctttgcccatgactctcca 565

                                                                       
Query: 366 ccattgactcaaagcagctgggtcaacccatcatgagtgaaactttcacagctcagcaga 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ccattgactcaaagcagctgggtcaacccatcatgagtgaaactttcacagctcagcaga 625

                                                                       
Query: 426 aagaacattc----agtactgtcaatattttcacagtgacgggaggctgaaggaaaacat 481
           ||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aagaacattctctcagtactgtcaatattttcacagtgacgggaggctgaaggaaaacat 685

                                                                       
Query: 482 aaacacatttcttcatgtataactcaggccatatgccatgtcacacacgggactcaaact 541
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 686 aaacacatttcttcatgtataactcaggccatacgccatgtcacacacgggactcaaact 745

                                                                       
Query: 542 tcagcccttcccataatatcctcagtattttggtggcattcacaaattattatcctatag 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 746 tcagcccttcccataatatcctcagtattttggtggcattcacaaattattatcctacag 805

                                                                       
Query: 602 tattctcgctctgtgttttaataattgacttgtattattttttaattatatgtgtgagtg 661
           ||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||
Sbjct: 806 tattctctctctgtgttttaataattgacttgtattattttttaattag--gtgtgagtg 863

                                 
Query: 662 tatgcctgtgtgggggtctcct 683
           ||||||||||||||||||||||
Sbjct: 864 tatgcctgtgtgggggtctcct 885


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1087
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1077
Effective search space:   726975
Effective search space used:   726975
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)