CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGGA
ATTCTTTGTCCTACCAGTAATTTATTTCACTGATAGCAGGAAAATATTTT
TCAAATTTATAAACTAAATATTCCAAAATATAAAATTTGAAAAGAAACCA
GAATATTTTCCTCCANCATAAGTGCAATTGGGAAAAAGTCACACTCATGA
ATTTGATGCANTAAACCAAGGGTTAAAGGNCCCCAAAATTTGCATATGAG
CAAACCCCCTTNNNTTTTCCCGGNNNTTCCCAAACGTAGGNNNNNNCCCC
CACGTTTTGCCCCGAGGAAGAAAGGAAGTGGGGAAATACTGTNNNNCATC
NNNNNNNCCACNTCAACCNNNNNGTAAGGAAAGAAGGGTCGGGACGGGGC
GGGTGGGGATGNNNAAANACANCCCTNNCCGATCGCCGGCGGTGNTGNNN
NCNACGCCANNCCNCATCCNNNNNNNCCCTCTTTTAAAAAAAAAAAACCC
CCTTTTTTTTAAAAAACCCNTTTTTTTTTTCAAAAAATTTTCCCCCCCCG
GGGGGGGGGCCCCCCCCCCCCNAAAAATTATTGGGGGGGGGAGCCCCCCC
CCCCCCCCCCCCCCCTTTTTTTTTTTTTAAAAAAAAAANNNGGGGGGGGG
GGGGGGGGCGGTCCCCTCCCCCCGCCCCCCCCTCCTTTTTTTTAACACCC
CCCTNNNNCCCCCCCCCCCCCCCGCCCCCCAAAAAGGGGGGGCCCCCCCC
CCCCCCCCACCAGGGGAGGAGGGGAGGGGGGGG

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTATAAAATGTCCGGAACACAGCTTCT
GTATGAAGTTTCTTTACTACCCTTTGTGTTTTAGAAGAGATAATTGTTTT
TTAATATGAATATTAGTCTATGGCAACAAATGTCTCAGCAATATCAAGGG
AATTATTTAGGGCTGTCAAACTTACCAATAAATACCATCAATAACAAACA
TTTTTGGAATGAAATGTTTACTTATTCCTTGACTTATGGAAGAGGTCATT
TGAGTGGATCAATAGTTGCAATCCACAGAACATAAGATAAGATCTTGGAA
GAACAAGAATGTGGGGATCAGGTGTCCATTAATTGCTAGCAAGAAAATGA
CATTAATGACTGGATATATCCTTGAAATAACAGTTGTTCAGCTTCAAGAG
CATTTCCCCATATATGTCCCAAGTTTCATCCTGTCAGCCCATGTGTCTGT
GTCCTTTTAAAAGTCCTCATCATCTAAGGAAACATGCAAATTCCATTTCC
TCAAAACCCAAGTGAGCCTAAGGTTAAAGTGAAGTAATCCCAATTCTATT
TAACTTTAAAATGAACACTTACTATATATGTAAATTTTATTATGGTATTG
CCACTTTATCTACCAGTTCTGCTTTGTTTTTTGTTTGTTTTTGTTTTTGT
TTGTTTGTTTGTTTCATTTTTGTGGATATTGCTCCGTCCTTGGGAAAAAC
TAGGCCATA

Query= MSMg01no542_f16.g1 MSMg01no542_f16.g1 CHROMAT_FILE:
MSMg01no542_f16.g1 PHD_FILE: MSMg01no542_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:22 2005
         (680 letters)



>mm_chr2_82382176_82383254
          Length = 1079

 Score = 1265 bits (654), Expect = 0.0
 Identities = 675/684 (98%), Gaps = 5/684 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tataaaatgtccggaacacagcttctgtatgaagtttctttactaccctttgtgttttag 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tataaaatgtccggaacacagcttctgtatgaagtttccttactaccctttgtgttttag 260

                                                                       
Query: 61  aagagataattgttttttaatatgaatattagtctatggcaacaaatgtctcagcaatat 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagagataattgttttt-aatatgaatattagtctatggcaacaaatgtctcagcaatat 319

                                                                       
Query: 121 caagggaattatttagggctgtcaaacttaccaataaataccatcaataacaaacatttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caagggaattatttagggctgtcaaacttaccaataaataccatcaataacaaacatttt 379

                                                                       
Query: 181 tggaatgaaatgtttacttattccttgacttatggaagaggtcatttgagtggatcaata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggaatgaaatgtttacttattccttgacttatggaagaggtcatttgagtggatcaata 439

                                                                       
Query: 241 gttgcaatccacagaacataagataagatcttggaagaacaagaatgtggggatcaggtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gttgcaatccacagaacataagataagatcttggaagaacaagaatgtggggatcaggtg 499

                                                                       
Query: 301 tccattaattgctagcaagaaaatgacattaatgactggatatatccttgaaataacagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tccattaattgctagcaagaaaatgacattaatgactggatatatccttgaaataacagt 559

                                                                       
Query: 361 tgttcagcttcaagagcatttccccatatatgtcccaagtttcatcctgtcagcccatgt 420
           |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 560 tgttcagcttcaagtgcatttccccatatatgtcccaagtttcatcttgtcagcccatgt 619

                                                                       
Query: 421 gtctgtgtccttttaaaagtcctcatcatctaaggaaacatgcaaattccatttcctcaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtctgtgtccttttaaaagtcctcatcatctaaggaaacatgcaaattccatttcctcaa 679

                                                                       
Query: 481 aacccaagtgagcctaaggttaaagtgaagtaatcccaattctatttaactttaaaatga 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 680 aacccaagtgagcctaaggttaaagtgaagtaatcccaattctatttaacttcaaaatga 739

                                                                       
Query: 541 acacttactatatatgtaaattttattatggtattgccactttatctaccagttctgctt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 acacttactatatatgtaaattttattatggtattgccactttatctaccagttctgctt 799

                                                                       
Query: 601 tgttttttgtttgtttttgtttttgtttgtttgtttgttt----catttttgtggatatt 656
           ||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||
Sbjct: 800 tgttttttgtttgtttttgtttttgtttgtttgtttgtttgtttcatttttgtggatatt 859

                                   
Query: 657 gctccgtccttgggaaaaactagg 680
           ||||||||||||||||||||||||
Sbjct: 860 gctccgtccttgggaaaaactagg 883


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1079
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1069
Effective search space:   716230
Effective search space used:   716230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)