Query= MSMg01no543_f09.b1 MSMg01no543_f09.b1 CHROMAT_FILE:
MSMg01no543_f09.b1 PHD_FILE: MSMg01no543_f09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:40 2005
(592 letters)
>mm_chr2_4087573_4088564
Length = 992
Score = 1098 bits (568), Expect = 0.0
Identities = 586/592 (98%)
Strand = Plus / Minus
Query: 1 ttcagagccagagatgatgaggatggtgatgcagaggtggaacgtgaggaggaggatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ttcagagccagagatgatgaggatggtgatgcagaggtggaacgtgaggaggaggatgca 603
Query: 61 gcaagttttaagatttccacctggcctcctcaaaggaacatgttcttaattgaatgtagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gcaagttttaagatttccacctggcctcctcaaaggaacatgttcttaattgaatgtagc 543
Query: 121 aaaatcaacatcagtgccaccagcacagacacacggctcctatggaaggttccttgtgac 180
||||||||||||| || ||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 542 aaaatcaacatcaatgtcaccagcacggacacacggttcctatggaaggttccttgtgac 483
Query: 181 aacaagctgctgccaccagtgctatgcagatcttttccttctttcatagacaaacatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aacaagctgctgccaccagtgctatgcagatcttttccttctttcatagacaaacatgca 423
Query: 241 cagggggatgggcagtgggaaataagggaaactcctgaggctgttggctttggtaataca 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cagggagatgggcagtgggaaataagggaaactcctgaggctgttggctttggtaataca 363
Query: 301 aactcactttccatgccaagctgctcccggagatgaacttggtttcctctggaaagactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aactcactttccatgccaagctgctcccggagatgaacttggtttcctctggaaagactc 303
Query: 361 ttgcttttgagtgaagctggtcatttactgtggagtttttgcaaagtacatatgagaagg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 302 ttgcttttgagtgaagctggtcatttactgtggagtttttgcaaagtacataggagaagg 243
Query: 421 aaataaagtatattataaaaaagtaaataaacagctgactgaggggataaggagattgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaataaagtatattataaaaaagtaaataaacagctgactgaggggataaggagattgct 183
Query: 481 cattgatcaacgtgcttgccatgcaaatgtaaggaccacaggagacaggattccaaaatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cattgatcaacgtgcttgccatgcaaatgtaaggaccacaggagacaggattccaaaatc 123
Query: 541 catgcaaatgctgtgtgcacatggtatcccatctgtaaatccagcactcggg 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 catgcaaatgctgtgtgcacatggtatcccatctgtaaatccagcactcggg 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_f09.g1 MSMg01no543_f09.g1 CHROMAT_FILE:
MSMg01no543_f09.g1 PHD_FILE: MSMg01no543_f09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:40 2005
(427 letters)
>mm_chr2_3944391_3945217
Length = 827
Score = 818 bits (423), Expect = 0.0
Identities = 426/427 (99%)
Strand = Plus / Plus
Query: 1 aggtaaattgcctgccccagaaggctcgtgatgctgctgagctaccatgcttacgttaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtaaattgcctgccccagaaggctcgtgatgctgctgagctaccatgcttacgttaat 260
Query: 61 gacctgtgtcgaaagttagagaagaagaagatgttaatacaggtgtggatttctaaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacctgtgtcgaaagttagagaagaagaagatgttaatacaggtgtggatttctaaaagt 320
Query: 121 cctcacattgggtcatccaactgtactaggtatctgggtataaggtagagcttattatta 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcacattgggtcatccaaccgtactaggtatctgggtataaggtagagcttattatta 380
Query: 181 atgttatttactctctagaagagctgttcccaaacttctatgggaactggttatatcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgttatttactctctagaagagctgttcccaaacttctatgggaactggttatatcatt 440
Query: 241 gttacatctaagtcaatagctaatatccttcttaaattcagttatctatcttctaaggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttacatctaagtcaatagctaatatccttcttaaattcagttatctatcttctaaggtt 500
Query: 301 caatttcttgatccataactaaaagcttgatattagtgagttttagctagtgtttaacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caatttcttgatccataactaaaagcttgatattagtgagttttagctagtgtttaacgt 560
Query: 361 ataaatgtatccctttaaaaaggagagatttgatgtcaatgacaataatgctaactcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataaatgtatccctttaaaaaggagagatttgatgtcaatgacaataatgctaactcatt 620
Query: 421 aattttt 427
|||||||
Sbjct: 621 aattttt 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
