XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTCA
GTGTTTGTTTCTGTGTCATTCTTTTGGCTTCTGATTTCGTTAATTTGAAT
ATTCCCCCTCTACCTTTACTTAATTTGAATAAGGCTTTGTCTATCTTGTT
GACTTTTGCAAAGTAACATGTTTCAGAGATTTCTTGTGTTGATCTGTTTG
TTCCTATTTTATTGACACTAGCCATCAGGTTGATTGTTTCCTGTAATTTA
TTTCCATTAGGTATGCTTACTTCTATTTGTTCTAGAGCTTTTAGGTGTGA
TAAGTCGCTAGGTTGGATATCTCCAACTTTTTTTTTCCATTTTTTATTAG
GTATTTAGCTCATTTACATTTCCAGTGCTATACCAAAAGTCCCCCATAGC
CACCCACTCCCACTCCCCTACCCACCCACTTCCCCTTTTTGGCCCTGGCG
TTCCCCTGTCCTGGGGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCTT
TCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCAAGAGTC
AAGAGCTCCGGGGTACACAGTATCTCCAACTTTTTTTATGTAGACACTTT
CAACACTGCTTTTTGTGTGTGTGTCCCGTATGTTCGTGCATCATGTGTAT
TCAATTCCATTTAGCGCCAGAACATTTTTAATTTCTTTATTTCTGTTTTG
ACCCCTATTTTATGGAACAGAGAGTT

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXACTTCAGATCAGAGAAGTATGACAATGAGTCC
ATGATCATGAAATTAACTAGTCTTACCATATGGAAAGGCTTTTGAAGACA
CAGTGCCAATTATGGGACAATAGCCTAGAGGGCTGAGGCAGAGTTATCCA
GAAGGTAGTAAATAATTTTAATCAGTATTTAATGCGTGGTACCATTTCTC
TTATATCCAGAATTCACAGGGTCAGAAATCAAGTAGTGGAAATAGAGTAA
TTCTATACACTATAACCACTAGGAAAACAAACAAACAAACAAACAAACAA
CAAAACAAAACAAAAAAAACTAGAATACATTTTGATTCCTGTTTCCATGA
CTTTTATTTTTGCTATCAGAGAAGCACTGGTTTCACAAAAAGAAACGTTT
ATACCATGAGAAATAACCAACCAACATTCCACTGGAATAGAATCTCAGAA
CCTACCCCCACCCCACCCCATCCCCCACCCTATCCCACACCCCCACTCCT
GCTCACTTAGGAATGCTAATGTCTTAGGGTCAGCAAGCTCAGAAGACAGA
GGTAGACAGGATGGCATTACAGATTACCATGGAGAAATTGATGACAGTCA
ATACATACCCTGTGATCAAAGTCAATGGGAAATGACAACAACCTAATCCA
GAAAGAATGACAAAGGGTACAAACCCAACAA

Query= MSMg01no545_d16.g1 MSMg01no545_d16.g1 CHROMAT_FILE:
MSMg01no545_d16.g1 PHD_FILE: MSMg01no545_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:09 2005
         (620 letters)



>mm_chr2_99606607_99607626
          Length = 1020

 Score =  627 bits (324), Expect = 0.0
 Identities = 364/388 (93%), Gaps = 23/388 (5%)
 Strand = Plus / Minus

                                                                        
Query: 235  ctatacactataaccactaggaaaacaaacaaacaaacaaacaaac--aacaaaacaaaa 292
            ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||  ||||
Sbjct: 1020 ctatacactataaccactaggaaaacaaacaaacaaacaaa-aaacaaaacaaa--aaaa 964

                                                                        
Query: 293  caaaaaaaactagaatacattttgattcctgtttccatgacttttatttttgctatcaga 352
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963  -aaaaaaaactagaatacattttgattcctgtttccatgacttttatttttgctatcaga 905

                                                                        
Query: 353  gaagcactggtttcacaaaaagaaacgtttataccatgagaaataaccaaccaacattcc 412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904  gaagcactggtttcacaaaaagaaacgtttataccatgagaaataaccaaccaacattcc 845

                                                                        
Query: 413  actggaatagaatctcagaacctacccccaccccaccccatcccccaccctatcccacac 472
            |||||||||||||||||||    |||||| |||||||||||||||            |||
Sbjct: 844  actggaatagaatctcaga----accccc-ccccaccccatcccc------------cac 802

                                                                        
Query: 473  ccccactcctgctcacttaggaatgctaatgtcttagggtcagcaagctcagaagacaga 532
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801  ccccactcctgctcacttaggaatgctaatgtcttagggtcagcaagctcagaagacaga 742

                                                                        
Query: 533  ggtagacaggatggcattacagattaccatggagaaattgatgacagtcaatacataccc 592
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 741  ggtagacaggatggcattacagattaccatggagaaattgatgacagtcaatacgtaccc 682

                                        
Query: 593  tgtgatcaaagtcaatgggaaatgacaa 620
            ||||||||||||||||||||||||||||
Sbjct: 681  tgtgatcaaagtcaatgggaaatgacaa 654


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space:   616100
Effective search space used:   616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)