Query= MSMg01no545_f10.b1 MSMg01no545_f10.b1 CHROMAT_FILE:
MSMg01no545_f10.b1 PHD_FILE: MSMg01no545_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:17 2005
(678 letters)
>mm_chr2_96297522_96298604
Length = 1083
Score = 1089 bits (563), Expect = 0.0
Identities = 649/679 (95%), Gaps = 7/679 (1%)
Strand = Plus / Plus
Query: 5 gaattccatctgaagtacaaaaattatctcaagaaaacctttttgtagtatacatgattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatctgaagtacaaaaattatctcaagaaaacctttttgtagtatacatgattt 264
Query: 65 atatgctttttcacaaaaaagtttgtgttagatttatgatatagttatagaagttcacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 265 atatgctttttcacaaaaaagtttgtgttagatttatgatatagttatagaagttcaaat 324
Query: 125 gttattaaa-aatctgcccc-c-ccctcaaaaaaaa--caaacaaaaggagaatgtgatg 179
||||||||| |||||||||| | ||||||||||||| ||||||||||||||||||||||
Sbjct: 325 gttattaaagaatctgccccactccctcaaaaaaaaaacaaacaaaaggagaatgtgatg 384
Query: 180 gtttgaataagtatggcccccccattcatgtgtttgaatgcttggactcagggactggtt 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 385 gtttgaataagtatggccccc--attcatgtgtttgaatgcttggactcagggactggct 442
Query: 240 ctattgagagatgtggccttgttggagtaggttaggtcttattggatgatgtatgccacc 299
|||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 443 ctattgagagatgtggacttgttggagtaggttaggtcttataggaggatgtatgccacc 502
Query: 300 gaggaagtgggctttgaggtcataattgctcatagtatgccagtgtaacaagaagtcctc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 503 gaggaagtgggctttgaggtcataattgctcatagtatgccagtgtaacaagcagtcctc 562
Query: 360 ttctgttgcctgtgggtaaaaatttagaaatctcagaaactttccttgctccaaatctgc 419
||||| ||||||| ||||||||| ||||| |||||| |||||| || |||||||||||||
Sbjct: 563 ttctgctgcctgttggtaaaaatgtagaattctcagcaacttttctagctccaaatctgc 622
Query: 420 ctacatgctgccatgcttcccaccatgataacaatggattaagcctctgaagctatcagc 479
|||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||
Sbjct: 623 ctacatgctgccatgcttcccaccatgataacaatggattaaacctttgaacctatcagc 682
Query: 480 caggcccaattaaatgttttcctttgtaagaattgccatggtcattttgtcctattgaca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 caggcccaattaaatgttttcctttgtaagaattgccatggtcattttgtcctattgaca 742
Query: 540 gtgtcctttgccttacagaagcttttcaattttatgaggtcccacttatcaattcttgat 599
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 743 gtgtcctttgccttacagaagcttttcaattttatgaggtctcacttatcaattcttgat 802
Query: 600 cttagagcataagccattggtgttctgttcaggaaatgttcccctgtgctcatgtattca 659
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 803 cttagagcctaagccattggtgttctgttcaggaaatgttcccctgtgcccatgtgctca 862
Query: 660 aggctctttcccactttct 678
||| |||||| ||||||||
Sbjct: 863 aggttctttctcactttct 881
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1083
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1073
Effective search space: 716764
Effective search space used: 716764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_f10.g1 MSMg01no545_f10.g1 CHROMAT_FILE:
MSMg01no545_f10.g1 PHD_FILE: MSMg01no545_f10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:17 2005
(645 letters)
>mm_chr2_96415396_96416440
Length = 1045
Score = 717 bits (371), Expect = 0.0
Identities = 377/379 (99%)
Strand = Plus / Minus
Query: 1 acttctttgttagtagtgaagctagtgttttagagcaatattcaaaaaacaaagtcagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acttctttgttagtagtgaagctagtgttttagagcaatattcaaaaaacaaagtcagcc 320
Query: 61 tcagcatcccgtgtgtcttgttccttttgtgtcaggcttatgggtagttttcttagattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcagcatcccgtgtgtcttgttccttttgtgtcaggcttatgggtagttttcttagattt 260
Query: 121 ttattttttaaatcatatttccttatttatttgtaaggacagacgatgatgcctcttcac 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttattttttaaatcatattttcttatttatttgtaaggacagacgatgatgcctcttcac 200
Query: 181 caccgaatgcatccagaagtcagagacaacttgcaggatctggttctttctttacaccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 caccgaatgcatccagaagtcagagacaacttgcaggatctggttctttctttacaccat 140
Query: 241 gtgggtcccaggagttgaactcaggtatccaggctcagactcaccctctgaaactgtctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gtgggtcccaggagttgaactcaggtatccaggctcagactcaccctctgaaactgtctt 80
Query: 301 gtgagacgagttagcttagttctgtagaagatacctggcatgagttcacttttgctttct 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 gtgagatgagttagcttagttctgtagaagatacctggcatgagttcacttttgctttct 20
Query: 361 atgcatttgcttatttttg 379
|||||||||||||||||||
Sbjct: 19 atgcatttgcttatttttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
