Query= MSMg01no545_n07.b1 MSMg01no545_n07.b1 CHROMAT_FILE:
MSMg01no545_n07.b1 PHD_FILE: MSMg01no545_n07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:55 2005
(648 letters)
>mm_chr2_77263688_77264738
Length = 1051
Score = 1199 bits (620), Expect = 0.0
Identities = 640/648 (98%), Gaps = 3/648 (0%)
Strand = Plus / Minus
Query: 4 ggaattctactttaaactttaaaatatctgtcatcagttagtggtttccgtccctctgtg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 ggaattctactttaaactttaaaatatctgtcatcagttagtggtttccgtccctctgtg 792
Query: 64 ctgtgtcaaatgtgtagataaggctgagacagatgaggcaaaagcttaagaagtccatag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ctgtgtcaaatgtgtagataaggctgagacagatgaggcaaaagcttaagaagtccatag 732
Query: 124 ccacatatcaatttacatacatacaggtttgcactgggtcccgaccaacccaaccccctc 183
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 731 ccacatatcaatttacatacataaaggtttgcactgggtcccgaccaacccaaccccctc 672
Query: 184 cccccaccacccaaacctggtctggtgtggagccctctgggcttttaaatttcatttctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cccccaccacccaaacctggtctggtgtggagccctctgggcttttaaatttcatttctc 612
Query: 244 acaagactgcacagggcactgggcgctctgactgactcccattcatttcttactgtttgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 acaagactgcacagggcactgggcgctctgactgactcccattcatttcttactgtttgg 552
Query: 304 aaaatagaaagataaagccaaagaaaatggtctcagaattcctcaaactgaaataccttg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aaaatagaaagataaagccaaagaaaatggtctcagaattcctcaaactgaaataccttg 492
Query: 364 gtcccatgagtcttacgtagtaactggttagtgtttttctgaaatgatggtggcttgttg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gtcccatgagtcttacgtagtaactggttagtgtttttctgaaatgatggtggcttgttg 432
Query: 424 cttgagg---tattggatgaaggaagaagaatgactgggcgtgccttcagcacctgcctc 480
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 431 cttgaggtattattggatgaaggaagaagaatgactgggcgtgccttcagcacttgcctc 372
Query: 481 aatgcctaatcctctctagtaaaatatgaagtataaaaaggaaaagttacttcctaaagt 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 371 aatgcctaatcctctctagtaaaatatgaagtatagaaaggaaaagttacttcctaaagt 312
Query: 541 tgcaatcctacagtgaccgcaagaagcacaagtctgcctttgggtcactgaggagtgtgg 600
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgcaatcctccagtgaccgcaggaagcacaagtctgcctttgggtcactgaggagtgtgg 252
Query: 601 gcactgggagcagagacagaatctggaaaatgggactctgcactttca 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gcactgggagcagagacagaatctggaaaatgggactctgcactttca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1051
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1041
Effective search space: 664158
Effective search space used: 664158
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_n07.g1 MSMg01no545_n07.g1 CHROMAT_FILE:
MSMg01no545_n07.g1 PHD_FILE: MSMg01no545_n07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:55 2005
(159 letters)
>mm_chr2_77179246_77179804
Length = 559
Score = 244 bits (126), Expect = 2e-69
Identities = 146/156 (93%), Gaps = 6/156 (3%)
Strand = Plus / Plus
Query: 1 tttagggtggcgacgccatatctcaaagtgttcaagtcatttggctgaaacagcctattg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttagggtggtgacgccatatctcaaagtgttcaagtcatttggctgaaacagcctattg 260
Query: 61 atgttttagacaggaacacggatgtgctttgtccctttcgcttcgattgtgtgggagtgt 120
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 261 atgttttagacaggaacacggatgtgctttgtccctttcacttcgattgtgtgggaatgt 320
Query: 121 gtatgaggaggtgtgtgtgtgaggaggtgtgtgtgt 156
||||||||||| ||||||||| |||||||||
Sbjct: 321 gtatgaggaggggtgtgtgtg------tgtgtgtgt 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 559
Length adjustment: 8
Effective length of query: 151
Effective length of database: 551
Effective search space: 83201
Effective search space used: 83201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
