Query= MSMg01no546_c07.b1 MSMg01no546_c07.b1 CHROMAT_FILE:
MSMg01no546_c07.b1 PHD_FILE: MSMg01no546_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:20 2005
(649 letters)
>mm_chr2_56732666_56733714
Length = 1049
Score = 1073 bits (555), Expect = 0.0
Identities = 592/607 (97%), Gaps = 5/607 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttaatgttgctcacaaattttatttggagacaagttctcacaaaattatcta 64
||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||
Sbjct: 607 gaattcatttaatgttgctcaaaaattttatttggagataagttctcacaaaattgtcta 548
Query: 65 ggttcaagtcacagtttctatatgggtcatgcaggcctcagactcattacttcacagctt 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 547 ggttcaagtcacactttctatatgggtcatgcaggcctcagactcattacttctcagctt 488
Query: 125 ctgcacctcaatagctgagattcagacacatccagccatacgtggatgttccagggattt 184
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ctgcacctcaaaagctgagattcagacacatccagccatacgtggatgttccagggattt 428
Query: 185 ctggatctgcactaaaaggatattgtcacactctacatatatcacatgcacatgcatggt 244
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 427 ctggatctgcactaaaaggatattgtctcactctacatatatcacatgcacatgcatggt 368
Query: 245 tttggggaggttcctgcaggtcttctctggaagtctatgaggcaattgaggtagaagacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tttggggaggttcctgcaggtcttctctggaagtctatgaggcaattgaggtagaagacc 308
Query: 305 atatcttactggatgcagtaggtaacaaatgaagaatgcattacatgctggaatcaggag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atatcttactggatgcagtaggtaacaaatgaagaatgcattacatgctggaatcaggag 248
Query: 365 tttaaactgttaggtacctagtatgaagagatggtatcatttgatgggcccagcatacct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tttaaactgttaggtacctagtatgaagagatggtatcatttgatgggcccagcatacct 188
Query: 425 ctgctgagccactctgctagcatggtttcattttgtttcttgtttttaaaaattaaaata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ctgctgagccactctgctagcatggtttcattttgtttcttgtttttaaaaattaaaata 128
Query: 485 taataacattacattctttctttccatctataccatgtgcttccactccctctcaaattt 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 taataacattacattctttctttccatctataccatgtgcttccactccctctcaaattc 68
Query: 545 aatgactctttttcttttagttattgttgcatatatatatatat-----tatgcatatgt 599
|| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 67 aaggactctttttcttttagttattgttgcatatatatatatatatatatatgcataagt 8
Query: 600 atacata 606
|||||||
Sbjct: 7 atacata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no546_c07.g1 MSMg01no546_c07.g1 CHROMAT_FILE:
MSMg01no546_c07.g1 PHD_FILE: MSMg01no546_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:20 2005
(296 letters)
>mm_chr2_56556583_56557278
Length = 696
Score = 551 bits (285), Expect = e-161
Identities = 291/293 (99%)
Strand = Plus / Plus
Query: 4 agccaatagcatatggcagagcaatttaagaaggcttccaagtctgcattataaagggca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 204 agccaatagcatatggcagagcaatttaagaaggcttccaagtctgcattataaaggaca 263
Query: 64 acccatcttcatcagataacccatatttgaaaccatgttttgctatgtgaggagcccaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acccatcttcatcagataacccatatttgaaaccatgttttgctatgtgaggagcccaca 323
Query: 124 tattctaatatcattctggagctaaagaagctaaagtatatagacagatatcagtaggtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tattctaatatcattctggagctaaagaagctaaagtatatagacagatatcagtaggtg 383
Query: 184 ctcctatcaccagcctagtcctttagacatcccgtttcagtgctaaatgtgtgactaagt 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttcctatcaccagcctagtcctttagacatcccgtttcagtgctaaatgtgtgactaagt 443
Query: 244 cacttttgtgtgagttgtagttcactttgtattaatacaaagagaatgcagat 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cacttttgtgtgagttgtagttcactttgtattaatacaaagagaatgcagat 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
