XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGCGGAATT
CCTATTCCTTTATGACTTTACTTCATGTCAAGTTAATGTCTAAAACAAAA
TCAAGCAAACGTTAATCAAACAAACAAACCAAAGCAAACACAACATGAAA
CAAAACACTCGTCAACAATGCTGAGTATGGGTTCTGAGAGTTTAAAAGCC
TCACACCAATTTGTCCTCTTGTGGTTCAAGATGTGAACTCTCAGCATCCT
GCTCCTGACACCATGATTTCCAGATTCAGTAGTTTGCTTTTTGTTTTGTT
TTGTTTTTGTGGTTTTTTTTTATTTATTATGTATAGTGTTCTGCCTGTGT
GTATGCCTGCAGGCCAGAGGAAGACACCAGATCTCATATGGTTGCTGGAA
ATTGAACTCAGGATTTCTGGGAGAACAGTCAGTGCTCCCAATCTTTGATC
TATTTAATGTTTGTTTGTTTACTTATTTATTTAATGTATATGCATGTTCT
GTCTTCATGCACACCAGGAGAGGGTATCAGATCCCATTACAGATGGTTGT
GAGACACCATGTTGGTGCTGGGAATTGAACTCAGGACCTCTTGAAGAACA
GTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCCAACATAGTATTT
TGTAAAACATTGTTTCCCTTTATCTGATTGTTCAAATGTAGCTGGGAAGG
AGAGGAAAAGGCAGGAGTTCCTGAACCAGATN

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTATGTGGGTGCTTTAAAAAGGGCTCCA
AATTGCCAATACACATATGAGATGATGATCATCTTGAGGAAATGTAGATT
GAAATTAGAAGATACTGCCGAGGTGCCCTGCTTTAAGTCACTCCTTCTTG
TGTAAGAGACTGACTTTCCAGACCGTGCCTTGCCCTGAGGGACTCCATGT
TACATAGCATCTCTGGACTCCATTTTGAAGATGAAGGATGGGCCTGGACC
ATGATTAGCACCATCTGTCTGGCACCACCAGGCAGCACAGACAAGCACAT
GACTTATCCCTGGAGTAGAACGAGTGCCACCCTAAAGATTTATTGGGTTG
AATTGGGACCATAGGAAGACATGGATGTGCTAAAATTCTATTAGTGAAAC
TAAGCCCAAGAATGTATTGGCGGTACTAGACAAAGGACAGAGTGTAACTC
TGTTGCCTAAACCCCATACAGAGTTGAACAATGACCTTGTCAGCCTGCCA
TCTGGCAATCTGGGATGTCCATTCAGAAAGAGAACTCCTAACTATCCTAG
GAGCCTCAGCTCATTCCCTTCTATCTATACTCCTGTTTGTTCATCTGGAC
CTATTACACACCTCCATCCACCAATGTTAGTCCATGCCTAGTTAGTCTTG
CTCTGTGATTAGTTGTTTTGG

Query= MSMg01no546_i10.g1 MSMg01no546_i10.g1 CHROMAT_FILE:
MSMg01no546_i10.g1 PHD_FILE: MSMg01no546_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:51 2005
         (536 letters)



>mm_chr2_65742704_65743639
          Length = 936

 Score =  975 bits (504), Expect = 0.0
 Identities = 528/536 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatgtgggtgctttaaaaagggctccaaattgccaatacacatatgagatgatgatcatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tatgtgggtgctttaaaaagggctccaaattgccaatacacatatgagatgatgatcatc 677

                                                                       
Query: 61  ttgaggaaatgtagattgaaattagaagatactgccgaggtgccctgctttaagtcactc 120
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 676 ttgaggaaatgtagattgaaattaaaagatactgccgaggtgccctgctttaagtcactc 617

                                                                       
Query: 121 cttcttgtgtaagagactgactttccagaccgtgccttgccctgagggactccatgttac 180
           |||||||| ||||||| ||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 616 cttcttgtataagagattgactctccagactgtgccttgccctgagggactccatgttac 557

                                                                       
Query: 181 atagcatctctggactccattttgaagatgaaggatgggcctggaccatgattagcacca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atagcatctctggactccattttgaagatgaaggatgggcctggaccatgattagcacca 497

                                                                       
Query: 241 tctgtctggcaccaccaggcagcacagacaagcacatgacttatccctggagtagaacga 300
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 496 tctgtctggcaccaccaggcagcacagacaaacacatgacttatccctggagtagaacga 437

                                                                       
Query: 301 gtgccaccctaaagatttattgggttgaattgggaccataggaagacatggatgtgctaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtgccaccctaaagatttattgggttgaattgggaccataggaagacatggatgtgctaa 377

                                                                       
Query: 361 aattctattagtgaaactaagcccaagaatgtattggcggtactagacaaaggacagagt 420
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 376 aattctattagtgaaactaagcccaagaatgtattggaggtactagacaaaggacagagt 317

                                                                       
Query: 421 gtaactctgttgcctaaaccccatacagagttgaacaatgaccttgtcagcctgccatct 480
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ataactctgttgcctaaaccccatacagagttgaacaatgaccttgtcagcctgccatct 257

                                                                   
Query: 481 ggcaatctgggatgtccattcagaaagagaactcctaactatcctaggagcctcag 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggcaatctgggatgtccattcagaaagagaactcctaactatcctaggagcctcag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space:   487076
Effective search space used:   487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)