Query= MSMg01no546_n21.b1 MSMg01no546_n21.b1 CHROMAT_FILE:
MSMg01no546_n21.b1 PHD_FILE: MSMg01no546_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:18 2005
(656 letters)
>mm_chr2_163574465_163575516
Length = 1052
Score = 1089 bits (563), Expect = 0.0
Identities = 617/649 (95%), Gaps = 24/649 (3%)
Strand = Plus / Plus
Query: 8 gaattcagaccatcaaaagaaaactcagcctttgatgtctaagagcaccaactgtggtca 67
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcagaccatcaaaagaaaactcaccctttgatgtctaagagcaccaactgtggtca 267
Query: 68 ggagccaccaggcaagatgtgcagcaggcattggttgggtaggaagacttgccctgccct 127
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ggagccaccagacaagatgtgcagcaggcattggttgggtaggaagacttgccctgccct 327
Query: 128 tctagcctctagctagaggggtagagtgtgttccctatggtaagtgcatggaatacaggc 187
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tctagcctctagctagaggggcagagtgtgttccctatggtaagtgcatggaatacaggc 387
Query: 188 ccactgcccatcttccctcccgctccctccatgcacacatatatgacacaacatgcacac 247
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 388 ccactgcccatcttccctcccgctccctccatgcacgcatatatgacacaacatgcacac 447
Query: 248 gggattcatacgtctgccaccccgcccccccactcagcatctgtttcttggaggggtaag 307
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 448 gggattcatacgtctgccaccccgcccccc-actcagcatctgtttcttggaggggtaag 506
Query: 308 tctaataagggtgactgtctctgatccctccccctgagttctcagtcccacactctgctg 367
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tctaa---gggtgactgtctctgatccctccccctgagttctcagtcccacactctgctg 563
Query: 368 accagttcaatttgcctggctgactactgggttgaatccctcgctggacagaatctgtaa 427
|||||||||||||||||||||||||| ||||||||||||||
Sbjct: 564 accagttcaatttgcctggctgacta--------------------gacagaatctgtaa 603
Query: 428 gggctgcaaatctgcccttggggacctggagtctccctgtttccaagaagccacagcttg 487
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gggctgcaaatctggccttggggacctggagtctccctgtttccaagaagccacagcttg 663
Query: 488 cggaaagacagataaagggttctcctctggggtcaagggctaaaacttcatcccaaataa 547
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cagaaagacagataaagggttctcctctggggtcaagggctaaaacttcatcccaaataa 723
Query: 548 acccatatggccaaacggtcagtatgtgtaggggttcctcctggcaccctgaagtctcta 607
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 724 acccatatggccaaacggtcagtatgtgtaggggttcctcctggcaccctgaagcctcta 783
Query: 608 tcccttccttttctggtttggatcatagattttcccacggccgcaccca 656
|||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 784 tcccttccttttctggtttggatcatagattttcccacgggcgcaccca 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1052
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1042
Effective search space: 673132
Effective search space used: 673132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no546_n21.g1 MSMg01no546_n21.g1 CHROMAT_FILE:
MSMg01no546_n21.g1 PHD_FILE: MSMg01no546_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:18 2005
(610 letters)
>mm_chr2_163768467_163769476
Length = 1010
Score = 601 bits (311), Expect = e-176
Identities = 356/371 (95%), Gaps = 1/371 (0%)
Strand = Plus / Minus
Query: 1 tccagactcactcttttcgcagattcctggtaagcaatgtggaaaagcagaaaagttaga 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 371 tccagactcactcttttcgcagattcctggtaagcaatatggaaaagcagaaaagttaga 312
Query: 61 gaacaaatatgtggccagcgaagagctcagttggcacggctcattgtctcgtgtcaggcg 120
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 311 gaacaaatatgtggccagcaaagagctcagttggcacggctcattgtcttgtgtcaggcg 252
Query: 121 atgagggcagcccatggctcctgtgtagactcagtccaaacgcctgacacgacaaactta 180
||||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 251 atgagggcatcccgtggctcctgtgtagactcagtccaaacgtctgacacgccaaactta 192
Query: 181 gagacactctagaaaagatctgactgctactcttcaaaagtgtcaaggccaggaagccaa 240
||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 191 gagacgctctagaaaagatctgaccgctactcttcaaaagtgtcaaggcccggaagccaa 132
Query: 241 gaaaattgagacggctcataggccagaggagaccaaggagatgggatatcttcacatagg 300
||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 131 gaaaactgagacggctcataggtcagaggagaccaaggagatgggacatcttcacatagg 72
Query: 301 gcgatgttctaattaaggaactagaagag-aaaatacatcagggggaaaaattagaaaat 359
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 71 gcaatgttctaattaaggaactagaagagaaaaatacatcagggggaaaaattagaaaat 12
Query: 360 ctgaattaaat 370
|||||||||||
Sbjct: 11 ctgaattaaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
