Query= MSMg01no546_o15.b1 MSMg01no546_o15.b1 CHROMAT_FILE:
MSMg01no546_o15.b1 PHD_FILE: MSMg01no546_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:22 2005
(649 letters)
>mm_chr2_110767364_110768412
Length = 1049
Score = 1208 bits (625), Expect = 0.0
Identities = 640/645 (99%)
Strand = Plus / Plus
Query: 5 gaattcaattatgtttgaaaaagtaagagaacatgggtattcaaatgatatgtaatattc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaattatgtttgaaaaagtaagagaacatgggtattcaaatgatatgtaatattc 264
Query: 65 ttttctcaaaaatttttatgatgcaatttttttctctttatagcctctaaaattatcatt 124
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 265 ttttctcaaaaatttttatgatgtaatttttttctctttttagcctctaaaattatcatt 324
Query: 125 taccctttgatggattttagtccttaatttatttagtactaatagacttgcagtttgaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taccctttgatggattttagtccttaatttatttagtactaatagacttgcagtttgaac 384
Query: 185 atattttgctagttgtttacaagcacttgtgtttaattttatgaaatttggaagtatagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atattttgctagttgtttacaagcacttgtgtttaattttatgaaatttggaagtatagt 444
Query: 245 aagtgattactataattgggaggcctctctgggctgtgcaattatttgacacttctttat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagtgattactataattgggaggcctctctgggctgtgcaattatttgacacttctttat 504
Query: 305 gcaactaaaatatttatcactgaacattcaaacatgtatttcttagcagctcaaagatca 364
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcaactaaaatatttatcactcaacattcaaacatgtatttcttagcagctcaaagatca 564
Query: 365 tctggcttaaacttatgccagaattgtgttgttaaagtgtctcttattagttcacatcta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctggcttaaacttatgccagaattgtgttgttaaagtgtctcttattagttcacatcta 624
Query: 425 aaattacatttgagaaactatagcataaagattgaaggtttgaatccgctgtgggatatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaattacatttgagaaactatagcataaagattgaaggtttgaatccgctgtgggatatg 684
Query: 485 tagcaaattcaatgtcatattgaactatatagtgagtctctctgttcagaaaaataaaga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tagcaaattcaatgtcatattgaactatatagtgagtctctctgttcagaaaaataaaga 744
Query: 545 aataggcctttttagaggctgtgattatttttttattatccttgatacagtaatgatctc 604
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 745 aataggcctttttagaggctgtgattatttttttattatccttgatacagtactgatctt 804
Query: 605 tgtaccatgggttctgaaatttgtttgtgagaacctacacttaaa 649
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tgtaccatgggttctgaaatttgtttgtgagaacctacacttaaa 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no546_o15.g1 MSMg01no546_o15.g1 CHROMAT_FILE:
MSMg01no546_o15.g1 PHD_FILE: MSMg01no546_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:22 2005
(682 letters)
>mm_chr2_110908928_110910009
Length = 1082
Score = 1187 bits (614), Expect = 0.0
Identities = 665/682 (97%), Gaps = 1/682 (0%)
Strand = Plus / Minus
Query: 1 ttttctctctatacacttgcaacctcttagcatgctagaaagggagaaaggtgaggttta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1059 ttttctctctatacacttgcaacctcttagcatgctagaaagggagaaaggtgaagttta 1000
Query: 61 tactctttgcacatactttccattctttctagtacagaaagtgcagctatcattcagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 tactctttgcacatactttccattctttctagtacagaaagtgcagctatcattcagaaa 940
Query: 121 gtgcctctatccctgtaagtctcccatggaactgggatttgggcatcttcgacatggctg 180
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 939 gtgcctctatccctgtaagtctcccatggaactgggatatgggcatctttgacatggctg 880
Query: 181 tactcatgccaacaatttacaattagagctatggttagagctagggctagggctacgttt 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 879 tactcatgccaacaatttacaattagagctatggttagagctatggctagggctacgatt 820
Query: 241 agggttagggattcactcactcaggcttctgtccagcactttcaataatgctatatttat 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 agggttaaggattcactcactcaggcttctgtccagcactttcaataatgctatatttat 760
Query: 301 atatttatgcatatatgtgtctgtgtgtgtttgtgtgcttatgtgtgcatacctctgtgt 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 759 atatttatgcatatatgtgtctgtgtgtgtttgtgtgcttatgtgtgcatgcctctgtgt 700
Query: 361 atgtgggtttgtgtaaaaagaagtcaataagaaagtgtgctaggcttgggctttggaaat 420
||||| |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||
Sbjct: 699 atgtgtgtttgtgtaaaaagaagtcaataagaaagtatgctaggtttggactttggaaat 640
Query: 421 actagggagagaacaaggaagtgtgggagtgatataattaaattttaattgagtttctgt 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 639 actagggagagaacaaggaagtgtgagagtgatataattaaattttaattgagtttctgt 580
Query: 481 aatgatttgagacagggtctcactcctgaagctcaagctgttctggaacttactatagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aatgatttgagacagggtctcactcctgaagctcaagctgttctggaacttactatagac 520
Query: 541 cagattggcttcaaaagactcaccaagatctgcttgtattcatttccaccgtactgggtt 600
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 519 cagattggcttcaaaagactcaccaagatctgcttgcattcacttccaccgtactgggtt 460
Query: 601 tataggcatgtgcaccatacttcgccattatatgttaattaaaaaaaa-caaacataatt 659
|| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 459 tacaggcatgtgcaccatacttcgccattatatcttaattaaaaaaaaacaaacataatt 400
Query: 660 ttaaaaaagtttgtcgctgggc 681
||||||||||||||||||||||
Sbjct: 399 ttaaaaaagtttgtcgctgggc 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space: 720384
Effective search space used: 720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
