Query= MSMg01no548_b17.b1 MSMg01no548_b17.b1 CHROMAT_FILE:
MSMg01no548_b17.b1 PHD_FILE: MSMg01no548_b17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:56 2005
(624 letters)
>mm_chr2_70897682_70898705
Length = 1024
Score = 1127 bits (583), Expect = 0.0
Identities = 610/619 (98%), Gaps = 5/619 (0%)
Strand = Plus / Plus
Query: 7 gaattcagtataatactattttgtaaagcaatctccaggtgactttacttacataaggaa 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcagtataatactattttgtaaagcaatctccaggtgactttacttacataaggaa 266
Query: 67 aatctggaagataaaccaaaatgtgggtttgttttaagtgatttattatttttattaatt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aatctggaagataaaccaaaatgtgggtttgttttaagtgatttattatttttattaatt 326
Query: 127 ttatttatgtgtatgcctctgtgtgcatagacatgtgtgagtgaggctcccgtagcattg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttatttatgtgtatgcctctgtgtgcatagacatgtgtgagtgaggctcccgtagcattg 386
Query: 187 gatgccctggaattggattacagagttgtgagcttcctgatgtgagggtaggaatcaaac 246
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 387 gatgccctggaattggattacagagttgtgagcttcctgatgtgagggtaggaaccaaac 446
Query: 247 ttgagtcctctggaagagtagcagtgctcttagctgctgaaccatctctcttggtttttt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 447 ttgagtcctctggaagagtagcagtgctcttagctgctgaaccatctctcttgatttttt 506
Query: 307 tttttaacatttttttcttgtgtttgtgtattacaaatttgtgattagaaaaaaaaaaga 366
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 507 tttt-aacatttttttcttgtgtttgtgtattacaaatttgtgattagaaaaaaaaa-ga 564
Query: 367 cagaacagttaaggaagacaatagaaagttgggatctgggtgctacaggcatgcaaaaga 426
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 565 cagaacagttaaggaaga-aatagaaagttgggatctgggtgctacaggcgtgcaaaaga 623
Query: 427 aatgtctgagcaaagactacctcagtttaaaacaactactac-aactaataatgataata 485
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 624 aatgtctgagcaaagactacctcagtttaaaacaactactactaa-taataatgataata 682
Query: 486 ataatgaataatattaatactagtgctttttttcttttttccccagtgttgcatcagagc 545
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ataatgaataatattaataatagtgctttttttcttttttccccagtgttgcatcagagc 742
Query: 546 caagaaaactttatgaaatgccaaaatgttccaaatcagaaaaaattgaggatgctttat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 caagaaaactttatgaaatgccaaaatgttccaaatcagaaaaaattgaggatgctttat 802
Query: 606 tatgggaatgcccagtggt 624
|||||||||||||||||||
Sbjct: 803 tatgggaatgcccagtggt 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_b17.g1 MSMg01no548_b17.g1 CHROMAT_FILE:
MSMg01no548_b17.g1 PHD_FILE: MSMg01no548_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:56 2005
(636 letters)
>mm_chr2_71059019_71060054
Length = 1036
Score = 1191 bits (616), Expect = 0.0
Identities = 631/636 (99%)
Strand = Plus / Minus
Query: 1 ccgtaggtggagcgaaatggaattgttgtatacttccaggatctgaaggctttgtcacta 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ccgtaggtggagtgaaatggaattgttgtatacttccaggatctgaaggctttgtcacta 777
Query: 61 tgacactgaagacaactcggtttgaagctatagcagaaggaaggactaccaaattagatc 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 776 tgacactgaagacaactcggtttgaagctatagcagaagaaaggactaccaaattagatc 717
Query: 121 agattctgctaaatggaaataatacaacactggttcctggagaaagacctgaatatgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 agattctgctaaatggaaataatacaacactggttcctggagaaagacctgaatatgaat 657
Query: 181 gaagttccttgacttatgctagatatagccttatgtttagattctatagcctaagtttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gaagttccttgacttatgctagatatagccttatgtttagattctatagcctaagtttct 597
Query: 241 gtaaagggaagtgcatctactttcctaagctaataatggttatcttgggaaagactgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gtaaagggaagtgcatctactttcctaagctaataatggttatcttgggaaagactgttt 537
Query: 301 ttgttttgtctgcctctttaaagactaataaaggttttttgttgctgttgttgtttcgtt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 536 ttgttttgtctgcctctttaaagactaataaaggttttttgttgctgttgttgttttgtt 477
Query: 361 gttttctgtcctgcccaagatcttgtatcaccggcctctacccacttctgctctttgcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gttttctgtcctgcccaagatcttgtatcaccggcctctacccacttctgctctttgcct 417
Query: 421 ctctctggctttttacactgcaaccacaggagcccagccaaggctagctttaccctcact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ctctctggctttttacactgcaaccacaggagcccagccaaggctagctttaccctcact 357
Query: 481 gttccctccacctggactgcccccactctcagccttagcatgctgggctgcttctgatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gttccctccacctggactgcccccactctcagccttagcatgctgggctgcttctgatct 297
Query: 541 tccagttctttcaaagctcttcctgagcaccagatctaaagctcagtctcactctgacat 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tcctgttctttcaaagctcttcctgagcaccagatctaaagctcagtctcactctgacat 237
Query: 601 caccatgataatccagctccctacaggaacactgca 636
|||||||||||||||||||||||||||||| |||||
Sbjct: 236 caccatgataatccagctccctacaggaactctgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
