Query= MSMg01no548_h15.b1 MSMg01no548_h15.b1 CHROMAT_FILE:
MSMg01no548_h15.b1 PHD_FILE: MSMg01no548_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:24 2005
(583 letters)
>mm_chr2_102687885_102688867
Length = 983
Score = 1067 bits (552), Expect = 0.0
Identities = 573/580 (98%), Gaps = 2/580 (0%)
Strand = Plus / Plus
Query: 5 gaattccctattatttcctattattagaaaccagtggttatcaatcttcctaattacaac 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctattacctcctattattagaaaccagtggttatcaatcttcctaattacaac 264
Query: 65 tctttaatacagttcctcatgttgtggtgttccctaaccataaaattattttcactgtta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctttaatacagttcctcatgttgtggtgttccctaaccataaaattattttcactgtta 324
Query: 125 ctactttacaactgtaattttgctactgttatgaaccataatgtgaatatctgtgctttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctactttacaactgtaattttgctactgttatgaaccataatgtgaatatctgtgctttc 384
Query: 185 tggaggttttaggtgaaccttgtgaaagggtcttatctccaaataagtttcaattcacag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggaggttttaggtgaaccttgtgaaagggtcttatctccaaataagtttcaattcacag 444
Query: 245 gttaagaactgatgttataggctgattgcctttcccaaccccctagggcaaagctaccag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttaagaactgatgttataggctgattgcctttcccaaccccctagggcaaagctaccag 504
Query: 305 gtcaaaatacttgagagctaatgaccacatatccccagagcttatttgtagctcctagac 364
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 505 gtcaaaatacttgagagctaatgaccacatatccccagagcctatttgtagctcctagac 564
Query: 365 actgatataaagcaacaggatatgccatttcttggtgttttcagaaaaggttttcagtgt 424
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 actgatataaagcaacaggttatgccatttcttggtgttttcagaaaaggttttcagtgt 624
Query: 425 caaaatatttttt-aaagtctatgttttttattcattaaccattacttgtttcttttatt 483
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caaaatatttttttaaagtctatgttttttattcattaaccattacttgtttcttttatt 684
Query: 484 ggtatgatcatttggtcagtagatgccttttatgaggtcatctcttcaatgactttccta 543
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 685 ggtatgatcatttggtcagtagatgc-ttttatgaggtcatctcttcaatgactttccta 743
Query: 544 aacataggaaaactaatttgaaattaaagttaggcatgta 583
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 744 aacataggaaaactaatttgaagttaaagttaggcatgta 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_h15.g1 MSMg01no548_h15.g1 CHROMAT_FILE:
MSMg01no548_h15.g1 PHD_FILE: MSMg01no548_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:24 2005
(651 letters)
>mm_chr2_102868580_102869630
Length = 1051
Score = 1011 bits (523), Expect = 0.0
Identities = 526/527 (99%)
Strand = Plus / Minus
Query: 125 ttgggggtttggtgtgttttatatatgggcttgtacacgtgtgcatgtgcgcgtgcgcgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 ttgggggtttggtgtgttttatatatgggcttgtacacgtgtgcatgtgcgcgtgcgcgt 992
Query: 185 ttgtgtgcactcgaacatgctcctgcactcgagaagagggcttcaggcagcttcgaggtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 ttgtgtgcactcgaacatgctcctgcactcgagaagagggcttcaggcagcttcgaggtg 932
Query: 245 cctgatgcagatgctgggaatcaagcattgatcctctacaagactagtgcatgctttcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 cctgatgcagatgctgggaatcaagcattgatcctctacaagactagtgcatgctttcaa 872
Query: 305 cctggcactcctctagccccctgttctttgtattgaagaatttgggatctgttgaggatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 cctggcactcctctagccccctgttctttgtattgaagaatttgggatctgttgaggatc 812
Query: 365 ttttaacattgtggcattgttgtgaatgaacagttacagagaaattataataataactgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ttttaacattgtggcattgttgtgaatgaacagttacagagaaattataataataactgg 752
Query: 425 ctgattccgagataaaagaataaaataatctagatagagtgaaaatgtcaccctcatagt 484
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ctgattctgagataaaagaataaaataatctagatagagtgaaaatgtcaccctcatagt 692
Query: 485 gcagaagtgacatgagagaggcaaaacagaatcaggctgtgcttcccattgttaagtgac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gcagaagtgacatgagagaggcaaaacagaatcaggctgtgcttcccattgttaagtgac 632
Query: 545 gtccctggactcttggtcttactccgcagaaagcacagaatttctgagaagatgaattgg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gtccctggactcttggtcttactccgcagaaagcacagaatttctgagaagatgaattgg 572
Query: 605 cttttggtttctgtgttcagccccagatttgccctgtgatatttggc 651
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cttttggtttctgtgttcagccccagatttgccctgtgatatttggc 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
