BAC Information

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BAC

Clone NameB6Ng01-001C12
ChromosomeX (Build37)
Map Location 123,302,435 - 123,303,505
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665611, EG626048, LOC100040410, LOC100039903, LOC665679
Downstream gene4932411N23Rik, Gm381, LOC100040472, Gm382, 4921511C20Rik, 4930412D23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001C12.b
ACCDH839557
length1,062
definitionDH839557|Mus musculus domesticus DNA, BAC clone: B6Ng01-001C12, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccagtttaacacatttttgtattaatttggtcaactttctca
taataaattcaattcaatcttgtatgtttatattaaaatattgatctctt
ctttgcaaacttgtgaacatgagttttccctgttttccatttgaccaggt
tttttttttctatcaaattcctccatttttccacgtttattgtaattttt
ttctttttatccaaatgctgtttaagaacatctcgaattttatcagaaaa
tgattctctacattttctctattaggaaaaatatgtttcctttgttttcc
attgtaactgaaggtttttccatcgaattcttccattataaaacattttt
ctataaattttgtcaattttctcaaaaatatatttgaataacattttgta
tttttttaaaattagatattttcctcaattacgtttccaattctatccca
aaagtcccccataccctccctcgcactcccctatcttacaatgatcacat
cagctgtctctcatagtgaacatgagttttctccatttttgatttgacca
atcgtttttcaatcaatttcctccattttaaccacatttttctgtacagg
tttcacttttatcagaaatagtgtataagaacatctcgaaatttatcaga
caatgtttctatcctttttctctaatgaaaaagaatatgttttctacgtt
ttcctctttagccggtgatttttcaatctattatttccattttaacacat
tgtgaaaatatttttttcagttttggacatatacattcgaatataatctt
ttattttatcgtaatgtgatgatctctagtttgaaaatagagaacatgaa
ttgtctaagtttccatttgaacggcctgtttgtcatcaatttcatccttt
taaccacattttttcctgtagttttctgacattgtatcagaaataatgta
ttaaatcatcgcgattccatcacataatgtttctctcattttctctatag
aaagaaaagttcaatacgactttctttctagccgtgacgtcttccaaaga
attcctccattt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_123302435_123303505
seq2: B6Ng01-001C12.b_43_1104 (reverse)

seq1  AAATGGAGGAATTCTTTGGAAAACACTACTGGTAGAAAGGAATGCGTATT  50
      ||||||||||||||||||||| ||   || | ||||||| ||  ||||||
seq2  AAATGGAGGAATTCTTTGGAAGACGTCACGGCTAGAAAGAAAGTCGTATT  50

seq1  AAACATATTTTTCTAATAGGAGAAAATTGAGAGAAACATTATTTGATGAA  100
       ||| | | ||||| ||| ||||||| ||||||||||||||| ||||| |
seq2  GAACTTTTCTTTCT-ATA-GAGAAAA-TGAGAGAAACATTATGTGATGGA  97

seq1  ATTCGAGATGTTCTAATACATTATTTCTGATAAAAATGTAAGAAAACTAC  150
      | ||| |||| | |||||||||||||||||| | ||||| ||||||||||
seq2  A-TCGCGATGATTTAATACATTATTTCTGAT-ACAATGTCAGAAAACTAC  145

seq1  AGGAAAAAATGTGGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTT  200
      |||||||||||||||||||| ||||||||||||| || |||||||| |||
seq2  AGGAAAAAATGTGGTTAAAA-GGATGAAATTGAT-GACAAACAGGCCGTT  193

seq1  CAAATGGAAAACTTAGAAAATTCATGTTCACTATTTTCAAAACTAGAGAT  250
      ||||||| ||||||||| ||||||||||| |||||||| |||||||||||
seq2  CAAATGG-AAACTTAGACAATTCATGTTCTCTATTTTC-AAACTAGAGAT  241

seq1  CATCATATTACGATAAAATAAAAGATTATATTCGAATGTATTTGTGACAA  300
      ||||| ||||||||||||||||||||||||||||||||||| |||  |||
seq2  CATCACATTACGATAAAATAAAAGATTATATTCGAATGTATATGT-CCAA  290

seq1  AATTGAAAAAAATATTTTAAAAACGTGTTAAAATGTAAATAATAGATTGA  350
      || ||||||||||||||| | || ||||||||||| ||||||||||||||
seq2  AACTGAAAAAAATATTTTCACAATGTGTTAAAATGGAAATAATAGATTGA  340

seq1  AAAATCACCGGGTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTA  400
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACCGGCTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTA  390

seq1  GAGAAAAAGGATAGAAACATTTTCTGATAAATTTCGAGATGTTCTTATAC  450
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAGAAAAAGGATAGAAACATTGTCTGATAAATTTCGAGATGTTCTTATAC  440

seq1  ACTATTTCTGATAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGG  500
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACTATTTCTGATAAAAGTGAAACCTGTACAGAAAAATGTGGTTAAAATGG  490

seq1  AGGAAATTGATTGAAAAACGATTGGTCAAATCGAAAATGGAGAAAACTCA  550
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGGAAATTGATTGAAAAACGATTGGTCAAATCAAAAATGGAGAAAACTCA  540

seq1  TGTTCACTATGAGAGACAGCTGATGTGATCATTGTAAGATAGGGTAGTGC  600
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTTCACTATGAGAGACAGCTGATGTGATCATTGTAAGATAGGGGAGTGC  590

seq1  GAGGGAGGGTATGGGGGACTTTTGGGATAGAATTGGAAACGTAATTGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGGTATGGGGGACTTTTGGGATAGAATTGGAAACGTAATTGAGG  640

seq1  AAAATATCTAATTTTAAAAAAATACAAAATGTTATTCAAATATATTTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATCTAATTTTAAAAAAATACAAAATGTTATTCAAATATATTTTTG  690

seq1  AGAAAATTGACAAAATTTATAGAAAAATGTTTTATAATGGAAGAATTCGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTGACAAAATTTATAGAAAAATGTTTTATAATGGAAGAATTCGA  740

seq1  TGGAAAAACCTTCAGTTACAATGGAAAACAAAGGAAACATATTTTTCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAACCTTCAGTTACAATGGAAAACAAAGGAAACATATTTTTCCTA  790

seq1  ATAGAGAAAATGGAGAGAATCATTTTCTGATAAAATTCGAGATGTTCTTA  850
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAAAATGTAGAGAATCATTTTCTGATAAAATTCGAGATGTTCTTA  840

seq1  AACAGCATTTGGATAAAAAGAAAAAAATTACAATAAACATGGAAAAATGG  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACAGCATTTGGATAAAAAGAAAAAAATTACAATAAACGTGGAAAAATGG  890

seq1  AGGAATTTGATAG-AAAAAAAAACCTGGTCAAATGGAAAACAGGGAAAAC  949
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTGATAGAAAAAAAAAACCTGGTCAAATGGAAAACAGGGAAAAC  940

seq1  TCATGTTCACAAGTTTGCAAAGAAGAGATCAATATTTTAATATAAACATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTCACAAGTTTGCAAAGAAGAGATCAATATTTTAATATAAACATA  990

seq1  CAAGATTGAATTGAATTTATTATGAGAAAGTTGACCAAATTAATACAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTGAATTGAATTTATTATGAGAAAGTTGACCAAATTAATACAAAA  1040

seq1  ATGTGTTAAAATGGAAGAATTC  1071
      |||||||||| |||||||||||
seq2  ATGTGTTAAACTGGAAGAATTC  1062