BAC Information

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BAC

Clone NameB6Ng01-005D16
ChromosomeX (Build37)
Map Location 121,575,061 - 121,615,961
singlet/doubletdoublet
Overlap geneEG434843
Upstream geneLOC665281, EG625591, LOC665325, EG382265, LOC665364, EG546368, LOC100038940, LOC100038941, EG625699, LOC100038942, LOC100039828
Downstream geneEG665463, EG665522, LOC100038969, LOC100038978, EG665579, EG665611, EG626048
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005D16.bB6Ng01-005D16.g
ACCDH842421DH842422
length8611,100
definitionDH842421|Mus musculus domesticus DNA, BAC clone: B6Ng01-005D16, 5' end.DH842422|Mus musculus domesticus DNA, BAC clone: B6Ng01-005D16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,575,061 - 121,575,922)(121,614,854 - 121,615,961)
sequence
gaattctttgacaaactatataaatctgttcctgtgacagttaggacctc
tattccctatcataaaagaaatatctgtgcagaggggttttacttcacaa
aagtggacaaatataaattttattaactatcttttcagagctatttatta
tcagctatctttgtctgggcatctctaagggctaaagtttgatgccttgg
tatatctatatattattcagtaataatattagggatattatatacttatt
ataactgacatacattgttctgatagattagaatagagcctggatagcta
tctcaaaatatttcaaaagcccaagtacacatatttcagggaatcatatc
taggggctacacaaattaagtataggactgaaaaatattatttctgataa
ttaaatcaatggaaaacatattctcacaaaaatatacttacatattttta
atatatttgtttgtaatctttcttagctagaagcaggtgttttatctggg
aaatgaccaaagcactggtgtgtctaatgcatagattatttctcagcaat
taaaaaacaatgagtactcccaccttatcctctctttctccatttatttt
tctccctctgatacacagacacaaaattttcaatcaataggaactcctct
ggaagtatcaggaaagtgccacacactacaaaacaagcattgggtaattt
ccaggccaatactctcattataattttaattttaataggaaaaaaactcc
cctagataccttaaagaggcagagactcactcccttctaaacataggtag
aataataggtgactgttgagaaatattctggagcaaagcagcaagtgaga
aatagaagaga
gaattcccttctttagttatacaggatgctacagactcttgtgtttgcag
atcacctcccacagcaccttgctcacataggattggatccagaaccttct
gtacagatggaatctgtcctagaacatcttttgtagatgtgtcacatcca
cgagtcatttctaaagatgggactgtggctagaactccttttgtagatgt
atcctgtcctacaaaccctttatgtgatagggtagtactcagaggatcct
gtacaggttttggaaatcgtagaatctttgatgtatattgggaattcttt
acatcctctcctacagatacagaatgtcccagtgtccccatgggctgcat
ggagggttgtatggtctcatcacactgtacaaatatggagcttgtttggc
tccctgggagcattttggcagaatcttggctgtttgggacctgatgacaa
gtcaggagggcccttttggctggtaggggatatttgaataattcttgatc
agatcgggactttctggagacccgttgtttagagagagcatctttcaatc
ctctgctagaatgagaatgttcagggtcacttttcataacaggagaatga
tttaatcttcctttctgtgggagagcagatttaagaacatgtctttgatg
ctcttccatagagggagataatcctagtggccacctaacagatggagaag
gtctcagaacccctggggaagatgctgatggttctagttcactttgtgta
tgtgcagaaggcacaagagtcccttttggaggactcagagtttctatcac
acctagcctatgtgtggaactctcagagcccctttctaaggatggcaaag
gtccttgagctcctggtatagggttggaaaattttgtctctgcttgggca
tgttatgagcggtgtgaggcgcactttgggaatcgtgtattgcattcttt
ccctttggactgtagagatgatctgagccattttttaatgttgaggactt
tgaaagcctcttggttaaagtggaagttctgaaatctcttggtcagccgg
ttcagtcctaactcactttactatagcgatttcatggggctactttgggg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_121575061_121575922
seq2: B6Ng01-005D16.b_47_907

seq1  GAATTCTTTGACAAACTATATAAATCTGTTCCTGTGACAGTTAGGACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGACAAACTATATAAATCTGTTCCTGTGACAGTTAGGACCTC  50

seq1  TATTCCCTATCATAAAAGAAATATCTGTGCAGAGGGGTTTTACTTCACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCTATCATAAAAGAAATATCTGTGCAGAGGGGTTTTACTTCACAA  100

seq1  AAGTGGACAAATATAAATTTTATTAACTATCTTTTCAGAGCTATTTATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGACAAATATAAATTTTATTAACTATCTTTTCAGAGCTATTTATTA  150

seq1  TCAGCTATCTTTGTCTGGGCATCTCTAAGGGCTAAAGTTTGATGCCTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTATCTTTGTCTGGGCATCTCTAAGGGCTAAAGTTTGATGCCTTGG  200

seq1  TATATCTATATATTATTCAGTAATAATATTAGGGATATTATATACTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTATATATTATTCAGTAATAATATTAGGGATATTATATACTTATT  250

seq1  ATAACTGACATACATTGTTCTGATAGATTAGAATAGAGCCTGGATAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGACATACATTGTTCTGATAGATTAGAATAGAGCCTGGATAGCTA  300

seq1  TCTCAAAATATTTCAAAAGCCCAAGTACACATATTTCAGGGAATCATATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAATATTTCAAAAGCCCAAGTACACATATTTCAGGGAATCATATC  350

seq1  TAGGGGCTACACAAATTAAGTATAGGACTGAAAAATATTATTTCTGATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGCTACACAAATTAAGTATAGGACTGAAAAATATTATTTCTGATAA  400

seq1  TTAAATCAATGGAAAACATATTCTCACAAAAATATACTTACATATTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCAATGGAAAACATATTCTCACAAAAATATACTTACATATTTTTA  450

seq1  ATATATTTGTTTGTAATCTTTCTTAGCTAGAAGCAGGTGTTTTATCTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTGTTTGTAATCTTTCTTAGCTAGAAGCAGGTGTTTTATCTGGG  500

seq1  AAATGACCAAAGCACTGGTGTGTCTAATGCATAGATTATTTCTCAGCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACCAAAGCACTGGTGTGTCTAATGCATAGATTATTTCTCAGCAAT  550

seq1  TAAAAAACAATGAGTACTCCCACCTTATCCTCTCTTTCTCCATTTATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAACAATGAGTACTCCCACCTTATCCTCTCTTTCTCCATTTATTTT  600

seq1  TCTCCCTCTGATACACAGACACAAAATTTTCAATCAATAGGAACTCCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTGATACACAGACACAAAATTTTCAATCAATAGGAACTCCTCT  650

seq1  GGAAGTATCAGGAAAGTGCCACACACTACAAAACAAGCATTGGGTAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTATCAGGAAAGTGCCACACACTACAAAACAAGCATTGGGTAATTT  700

seq1  CCAGGCCAATACTCTCATTATAATTTTAATTTTAATAGGAAAAAAACTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCAATACTCTCATTATAATTTTAATTTTAATAGGAAAAAAACTCC  750

seq1  CCTAGATACCTTAAAGAGGCAGAGACTCACTCCCTTCTAAACATAGGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATACCTTAAAGAGGCAGAGACTCACTCCCTTCTAAACATAGGTAG  800

seq1  AATAATAGGTGACTGTTGAGAAATATTCTGGAGCAAAGCAGCAAGTGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAGGTGACTGTTGAGAAATATTCTGGAGCAAAGCAGCAAGTGAGA  850

seq1  AATAGGAAGAGA  862
      |||| |||||||
seq2  AATA-GAAGAGA  861

seq1: chrX_121614854_121615961
seq2: B6Ng01-005D16.g_68_1167 (reverse)

seq1  CCCCAAAGT-GCCCCATGCAATCTGCTTCTAGTAAAGTGAGTTTGAGACC  49
      ||||||||| |||||||| |||| || | ||||||||||||||  ||  |
seq2  CCCCAAAGTAGCCCCATGAAATC-GC-TATAGTAAAGTGAGTT--AGGAC  46

seq1  TGACCCTGCTGACCAAGAGGATTTCAGAACTTCCCCTTTAAACCAAGAGG  99
      ||| || ||||||||||| ||||||||||||||| |||| |||||||| |
seq2  TGAACCGGCTGACCAAGA-GATTTCAGAACTTCCACTTT-AACCAAGA-G  93

seq1  GCTTTCAAAGTCCTCTACCATTAAAAAATGGGCTCAGATCATCTCTTACA  149
      ||||||||||||||| | ||||||||||| ||||||||||||||| ||||
seq2  GCTTTCAAAGTCCTC-AACATTAAAAAAT-GGCTCAGATCATCTC-TACA  140

seq1  GTCCAAAGGGAAAGAAATGCAAT-CACGATTCCCAAAGTGCGCCTCACAC  198
      |||||||||||||| |||||||| ||||||||||||||||||||||||||
seq2  GTCCAAAGGGAAAG-AATGCAATACACGATTCCCAAAGTGCGCCTCACAC  189

seq1  CGCTCAT-ACCTGCCCAAGCAGAGACAAAATTTTCCACACCTATACCAGG  247
      ||||||| || ||||||||||||||||||||||||||  |||||||||||
seq2  CGCTCATAACATGCCCAAGCAGAGACAAAATTTTCCAACCCTATACCAGG  239

seq1  AGCTCAAGGACCTTTGCCATCCTTAG-AAGGGGCTCTTGAGAGTTCCACA  296
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  AGCTCAAGGACCTTTGCCATCCTTAGAAAGGGGCTC-TGAGAGTTCCACA  288

seq1  CATAGGCTAGGTGTGATAGAAACTCCTGAGTCCTCC-AAAGGGACTCTTG  345
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  CATAGGCTAGGTGTGATAGAAACT-CTGAGTCCTCCAAAAGGGACTCTTG  337

seq1  TGCCTTCTGCACATACACAAAGTGAACTAGAACCATCAGCATCTTCCCCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTGCACATACACAAAGTGAACTAGAACCATCAGCATCTTCCCCA  387

seq1  GGGGTTCTGAGACCTTCTCCATCTGTTAGGTGGCCACTAGGATTATCTCC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTCTGAGACCTTCTCCATCTGTTAGGTGGCCACTAGGATTATCTCC  437

seq1  CTCTATGGAAGAGCATCAAAGACATGTTCTTAAATCTGCTCTCCCACAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGGAAGAGCATCAAAGACATGTTCTTAAATCTGCTCTCCCACAGA  487

seq1  AAGGAAGATTAAATCATTCTCCTGTTATGAAAAGTGACCCTGAACATTCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGATTAAATCATTCTCCTGTTATGAAAAGTGACCCTGAACATTCT  537

seq1  CATTCTAGCAGAGGATTGAAAGATGCTCTCTCTAAACAACGGGTCTCCAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTAGCAGAGGATTGAAAGATGCTCTCTCTAAACAACGGGTCTCCAG  587

seq1  AAAGTCCCGATCTGATCAAGAATTATTCAAATATCCCCTACCAGCCAAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCCGATCTGATCAAGAATTATTCAAATATCCCCTACCAGCCAAAA  637

seq1  GGGCCCTCCTGACTTGTCATCAGGTCCCAAACAGCCAAGATTCTGCCAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTCCTGACTTGTCATCAGGTCCCAAACAGCCAAGATTCTGCCAAA  687

seq1  ATGCTCCCAGGGAGCCAAACAAGCTCCATATTTGTACAGTGTGATGAGAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCCAGGGAGCCAAACAAGCTCCATATTTGTACAGTGTGATGAGAC  737

seq1  CATACAACCCTCCATGCAGCCCATGGGGACACTGGGACATTCTGTATCTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAACCCTCCATGCAGCCCATGGGGACACTGGGACATTCTGTATCTG  787

seq1  TAGGAGAGGATGTAAAGAATTCCCAATATACATCAAAGATTCTACGATTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAGGATGTAAAGAATTCCCAATATACATCAAAGATTCTACGATTT  837

seq1  CCAAAACCTGTACAGGATCCTCTGAGTACTACCCTATCACATAAAGGGTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACCTGTACAGGATCCTCTGAGTACTACCCTATCACATAAAGGGTT  887

seq1  TGTAGGACAGGATACATCTACAAAAGGAGTTCTAGCCACAGTCCCATCTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGACAGGATACATCTACAAAAGGAGTTCTAGCCACAGTCCCATCTT  937

seq1  TAGAAATGACTCGTGGATGTGACACATCTACAAAAGATGTTCTAGGACAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGACTCGTGGATGTGACACATCTACAAAAGATGTTCTAGGACAG  987

seq1  ATTCCATCTGTACAGAAGGTTCTGGATCCAATCCTATGTGAGCAAGGTGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATCTGTACAGAAGGTTCTGGATCCAATCCTATGTGAGCAAGGTGC  1037

seq1  TGTGGGAGGTGATCTGCAAACACAAGAGTCTGTAGCATCCTGTATAACTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAGGTGATCTGCAAACACAAGAGTCTGTAGCATCCTGTATAACTA  1087

seq1  AAGAAGGGAATTC  1108
      |||||||||||||
seq2  AAGAAGGGAATTC  1100