MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-006D23
Chromosome	X (Build37)
Map Location	94,367,343 - 94,368,366
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC668221, Vsig4, B230358A15Rik, Heph, Gpr165, LOC675824, LOC668234, EG668236, LOC668238, Pgr15l
Downstream gene	Eda2r, LOC668244, Ar
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668221 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668221
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Vsig4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:278180 MGI:2679720
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B230358A15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245525 MGI:3045337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Heph (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15203 MGI:1332240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gpr165 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76206 MGI:1923456
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675824 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675824
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC668234 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG668236 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668236 MGI:3648922
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein pseudo : _no_value

name	LOC668238 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Pgr15l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245526 MGI:2676330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eda2r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245527 MGI:2442860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668244 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ar (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11835 MGI:88064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vsig4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382466 GeneID:278180 MGI:2679720
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : V-set and immunoglobulin domain containing 4 transcript_id : NM_177789.3

name	B230358A15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370938 GeneID:245525 MGI:3045337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230358A15 gene transcript_id : NM_172931.2

name	Heph (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754179 GeneID:15203 MGI:1332240
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hephaestin transcript_id : NM_010417.1

name	Heph (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349030 GeneID:15203 MGI:1332240
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hephaestin transcript_id : NM_181273.3

name	Gpr165 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388875 GeneID:76206 MGI:1923456
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 165 transcript_id : NM_029536.2

name	Pgr15l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802340 GeneID:245526 MGI:2676330
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 15-like transcript_id : NM_001033361.2

name	Eda2r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353600 GeneID:245527 MGI:2442860
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ectodysplasin A2 isoform receptor transcript_id : NM_175540.4

name	Ar (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129906 GeneID:11835 MGI:88064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : androgen receptor transcript_id : NM_013476.3

name	Vsig4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244314 CCDS:CCDS30288.1 GeneID:278180 MGI:2679720
definition	codon_start : 1 product : V-set and immunoglobulin domain containing 4 protein_id : NP_808457.1

name	B230358A15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370438 GeneID:245525 MGI:3045337
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : hypothetical protein LOC245525 protein_id : NP_766519.1

name	Heph (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754180 CCDS:CCDS30289.1 GeneID:15203 MGI:1332240
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005507 - copper ion binding [Evidence IEA]; GO:0005375 - copper ion transporter activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006825 - copper ion transport [Evidence IEA]; GO:0030218 - erythrocyte differentiation [Evidence IMP]; GO:0006811 - ion transport [Evidence IEA]; GO:0006826 - iron ion transport [Evidence TAS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; haphaestin; sex linked anemia product : hephaestin isoform 1 protein_id : NP_034547.1

name	Heph (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30911107 CCDS:CCDS30290.1 GeneID:15203 MGI:1332240
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005507 - copper ion binding [Evidence IEA]; GO:0005375 - copper ion transporter activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006825 - copper ion transport [Evidence IEA]; GO:0030218 - erythrocyte differentiation [Evidence IMP]; GO:0006811 - ion transport [Evidence IEA]; GO:0006826 - iron ion transport [Evidence TAS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; haphaestin; sex linked anemia product : hephaestin isoform 2 protein_id : NP_851790.1

name	Gpr165 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626052 CCDS:CCDS30291.1 GeneID:76206 MGI:1923456
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 165 protein_id : NP_083812.1

name	Pgr15l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781789 CCDS:CCDS30292.1 GeneID:245526 MGI:2676330
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004983 - neuropeptide Y receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G protein-coupled receptor PGR15L product : G protein-coupled receptor 15-like protein_id : NP_001028533.1

name	Eda2r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982201 CCDS:CCDS30293.1 GeneID:245527 MGI:2442860
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0004872 - receptor activity [Evidence ISS]; GO:0005031 - tumor necrosis factor receptor activity [Evidence ISS] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence ISS]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0009790 - embryonic development [Evidence ISS]; GO:0008544 - epidermis development [Evidence ISS]; GO:0046330 - positive regulation of JNK cascade [Evidence ISS] codon_start : 1 exception : mismatches in translation product : X linked ectodysplasin receptor protein_id : NP_780749.2

name	Ar (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304901 CCDS:CCDS30294.1 GeneID:11835 MGI:88064
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] [Evidence IDA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IPI] [Evidence IDA] GO_function : GO:0004882 - androgen receptor activity [Evidence ISS] [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030521 - androgen receptor signaling pathway [Evidence IDA]; GO:0016049 - cell growth [Evidence ISS]; GO:0050875 - cellular physiological process [Evidence IDA]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0008584 - male gonad development [Evidence IMP]; GO:0019102 - male somatic sex determination [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : testicular feminization product : androgen receptor protein_id : NP_038504.1

name	LOC668221 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668221
definition	number : 2 pseudo : _no_value

name	LOC668221 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668221
definition	number : 1 pseudo : _no_value

name	LOC675824 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675824
definition	number : 5 pseudo : _no_value

name	LOC675824 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675824
definition	number : 4 pseudo : _no_value

name	LOC675824 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675824
definition	number : 3 pseudo : _no_value

name	LOC675824 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675824
definition	number : 2 pseudo : _no_value

name	LOC675824 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675824
definition	number : 1 pseudo : _no_value

name	LOC668234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668234
definition	number : 5 pseudo : _no_value

name	LOC668234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668234
definition	number : 4 pseudo : _no_value

name	LOC668234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668234
definition	number : 3 pseudo : _no_value

name	LOC668234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668234
definition	number : 2 pseudo : _no_value

name	LOC668234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668234
definition	number : 1 pseudo : _no_value

name	LOC668238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668238
definition	number : 3 pseudo : _no_value

name	LOC668238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668238
definition	number : 2 pseudo : _no_value

name	LOC668238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668238
definition	number : 1 pseudo : _no_value

name	LOC668244 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668244
definition	number : 1 pseudo : _no_value

name	EG668236 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271831 GeneID:668236 MGI:3648922
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : predicted gene, EG668236 pseudo : _no_value transcript_id : XR_033838.1

clone name	MSMg01-335E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274D10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-059D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353K05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-070J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213E20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-291D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158H20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-006D23.b	B6Ng01-006D23.g
ACC	DH843162	DH843163
length	1,212	1,017
definition	DH843162\|Mus musculus domesticus DNA, BAC clone: B6Ng01-006D23, 5' end.	DH843163\|Mus musculus domesticus DNA, BAC clone: B6Ng01-006D23, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggcccatccttaaacacaataaaagtaatctacaccaaacca gtagccaacatcaaagtaaatgtagagaagctggaagcaatcccacaaaa atcagggactagacaaggctgcccactttctccctacctattcaatatag tacttgaagtcctagccagagcagttcgacaacaaaaagaggtcaatggg gatacaaattggaaaggaagaagtcaaaatatcactatttgcagatgata tgatagtatatataagtgaccctaaaaattccatcagagaactcctaaat ccgataaacagcttcagtgaagtagctagatataaaattaactcaaatga atcagtggcctctttctacacaaaggataaacaggctgagaaagaaatta ggggaacaatacctttcataatagtcacaaaaaatataaactaccttggt gtaactctaactaaggaagtgaaatatctgtatgacaagaacttcaagtc tctgaagaaagaaattgcaaaaagatctcagaagatggaaagatcttcca tgctcatggattggcaggattaatatagtataaaaatggctatcctgcca aaagcaatctccaggttcaatgtgatccccatcaaaattccaactcaatt cttcacagagatagaaagggcaatttgcaaattcatctggaataacaaaa aacctaagagagcaaaaattattctcaacaataaaagaacctctggggaa atcaccatgcctgatttcaagctgtactactgaggaattgcaataaaaac ttcatggtactggtacagtgacagacaggtagatcaatggaatggaactg aagacccagaaatgaacccacacacctatgattacttgatctttgacaag gggccaaaactatacagtgggaaaaagacagcattttcaacaaatggtga tggcacaactggcggttatcatgtagaagaattcaaattgatcaattctt ctctccttgtacaaagctcagtctatgtagatcaaagacttcacataaaa caagagaaactgaaatttatagagggtagtgagaaagcctcaaatatggg cacagggcaaatctaattgaacgcattgctggcctagatcagaattaatg gactctaactgcaagcttgtggaaagatcgtcgtagacaaaaggctccaa cgaatgttaata	gaattctttgcatattttggctttttgtgttctatatacaaagccatatc atatccaatgagtacatactttcttcacctataaagatacttatgatgtc tttgggagggaatcctaggataacttccacatttcaaaattattaaatta gtaatatgcaaataatgtttgaaatattcatatgtttcagatattagaat ctgaatatatgtggggaatttcaacctagttcgataacttaatacatttt aaggagtcagaggcattcatcagtagtgtagtacttccctagcatgcatg aattctcaagatcaattcctggcactacaaaacacatatttaatgcaagt cttgcatatatattgttaacttttctgctaaaatgtttcaaagaatgccc aatggataaaaccttttttaaaaaaactggcattaggacaactgaacttt ctttcataatacatataaaatctgcccaagatgaattaaatatttgtctg gaaataaaccatatctaaaccatgtatttactccacactgtgtacctgta tggaaacaccattactggagacttgagagatggtttgaagttaggtgcac ttatccattcttccagaagaactaagctaaattccaagaagctatactgg gtgacaacaacctgactccactaaattcatagcaggtttatttataatag ccaggagctggaaagaatccagatgtctctcaatagaggaatggatacag aaaatgtggtacatatggagtactattcagctattaaaaacaatgaattt atgaaattcttaggcaaatggatggaactggaggataacttcctgagtga ggtaacccaatagcaaaggaacacacatgatatacactcactgataagtg atattagcccagaagctcggatacccaagatacaaatcacacaccacatg aaactcagaagaagaggaccgagtgtgattattttgatttttcttagaag gggaacaaaatcccatg
quality values	Open. Hide. 61 43 33 33 61 38 24 47 61 61 61 55 47 29 61 61 61 61 61 61 61 61 43 39 61 52 61 61 61 61 61 61 49 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 35 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 61 61 61 61 50 50 61 61 61 50 61 61 61 50 50 61 61 61 61 50 61 61 61 61 61 61 61 61 50 61 45 61 61 61 61 61 53 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 52 61 61 61 61 61 52 61 46 61 61 61 61 53 61 61 61 43 39 61 61 61 61 53 61 61 52 42 61 61 61 50 61 47 61 61 61 61 42 61 61 61 53 61 57 53 47 57 57 47 42 53 57 57 57 53 53 47 50 53 53 50 53 57 57 45 53 28 57 57 53 57 57 53 53 40 52 53 53 47 53 34 53 57 57 57 53 45 53 53 57 42 38 57 57 57 42 52 40 57 42 27 53 43 57 52 53 52 53 53 50 53 52 50 57 57 57 53 45 57 57 42 53 50 53 45 57 53 57 47 47 26 47 57 53 50 53 42 47 46 50 53 43 47 32 50 57 53 53 45 42 57 50 57 42 57 36 39 45 28 19 33 45 53 40 45 57 57 52 50 53 36 46 27 52 53 57 40 45 52 50 57 45 45 46 42 40 50 42 53 57 42 40 39 45 53 53 57 53 34 43 57 30 33 53 37 57 57 46 37 21 46 39 38 53 42 42 53 50 52 53 53 35 44 36 37 53 47 34 35 57 52 53 39 25 33 34 31 57 31 57 33 57 37 53 28 53 57 57 41 40 53 40 31 45 37 52 36 33 46 35 24 53 38 23 57 57 57 40 52 27 21 14 44 36 40 45 57 57 53 53 57 38 40 37 40 41 41 30 44 48 37 44 40 47 37 25 57 53 34 29 34 32 47 44 46 31 32 32 30 30 36 30 47 31 13 48 47 31 27 46 38 28 29 33 45 30 51 51 51 29 33 29 48 29 28 29 46 34 28 29 29 29 43 38 30 25 36 28 31 29 45 26 29 21 29 34 21 29 38 46 22 30 30 29 32 35 27 31 29 46 28 31 29 28 43 43 31 29 30 29 41 33 32 24 35 17 36 30 15 29 46 51 26 29 29 26 32 26 36 39 20 36 25 29 27 35 34 33 28 29 31 34 24 30 23 31 23 26 16 23 28 27 21 44 19 20 29 23 20 8 12 26 46 46 18 21 15 36 44 32 22 29 28 32 25 35 31 28 19 38 51 38 31 51 51 51 36 13 32 17 31 26 20 21 35 51 51 28 30 34 7 9 13 31 12 16 38 33 22 33 15 8 20 27 14 12 17 10 17 31 29 33 30 19 19 28 14 10 11 29 26 22 13 21 13 13 9 29 24 10 11 23 6 21 23 21 34 9 11 18 22 26 28 13 12 15 21 14 21 6 13 14 11 9 12 9 11 11 10 13 13 18 28 9 28 21 14 15 18 10 30 16 11 10 11 9 6 7 9 10 15 24 24 6 7 25 8 4 16 7 14 10 10 3 3 6 8 7 27 26 5 12 15 20 9 4 6 13 4 5 9 16 11 8 30 7 13 27 19 7 12 7 5 16 6 3 3 3 10 5 9 12 3 4 19 29 17 8 14 7 13 3 4 15 14 3 4 8 7 25 12 4 3 4 2 4 20 6 1 4 24 14 13 8 4 10 9 4 3 6 16 5 3 7 14 17 5 7 11 3 2 5 15 4 4 17 9 8 20 12 12 15 4 12 13 10 4 5 5 9 7 13 4 6 6 7 9 13 13 3 5 8 3 3 6 4 6 4 3 3 2 1 13 14 13 8 5 17 5 5 6 5 8 3 5 6 4 16 4 4 18 11 7 10 5 4 1 6 4 6 4 9 5 6 12 4 3 1 1 4 9 3 13	Open. Hide. 61 47 43 47 61 61 61 61 61 55 61 55 61 61 61 61 61 61 55 30 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 59 59 59 44 44 61 59 55 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 47 61 53 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 57 53 57 53 52 57 57 57 53 57 53 53 53 47 53 53 53 45 53 53 57 57 57 47 57 53 53 47 47 53 57 57 53 53 57 57 53 53 53 53 42 47 33 47 52 52 50 47 47 53 57 47 40 53 46 46 47 53 57 45 57 52 53 45 57 53 47 57 57 47 57 57 47 57 47 50 47 43 53 57 53 53 52 53 53 52 53 53 52 42 52 57 53 52 47 35 53 45 38 57 57 30 57 35 35 50 50 53 50 53 52 40 57 42 53 53 42 38 28 53 45 57 57 28 46 53 42 53 45 53 52 57 41 43 52 57 34 33 36 39 53 28 36 47 46 53 53 38 37 37 42 52 36 47 42 37 41 38 50 52 42 42 50 50 37 50 38 14 57 42 57 40 36 52 41 53 40 37 34 37 41 43 34 46 34 30 40 43 40 18 37 40 37 53 47 57 52 40 53 34 30 32 41 33 33 41 30 57 37 41 6 53 47 33 23 43 31 47 27 37 28 37 40 57 29 57 30 37 33 20 29 17 29 36 57 51 23 29 39 23 37 40 32 36 30 26 45 30 30 30 44 25 23 32 34 30 30 37 48 35 32 29 29 38 39 28 31 29 22 51 46 45 29 29 12 32 29 43 31 29 29 51 30 17 27 30 38 51 15 7 23 29 19 39 26 23 15 21 25 46 29 28 29 46 18 24 15 34 17 24 24 30 29 34 36 24 31 27 5 12 20 30 37 18 28 31 33 33 27 14 27 25 17 29 35 25 28 27 29 30 26 12 19 34 34 25 38 33 43 29 26 29 20 26 23 14 31 12 22 16 34 30 20 17 27 29 23 23 16 28 34 41 19 29 27 38 33 24 26 29 14 28 35 46 20 9 6 33 29 11 31 31 33 12 17 33 25 14 26 30 25 17 13 26 6 8 23 31 24 15 19 12 29 18 14 38 15 38 23 26 21 19 28 11 19 14 32 11 7 7 12 28 30 23 39 19 25 33 27 34 22 28 24 9 22 11 4 8 5 7 21 11 23 19 20 4 8 11 7 14 4 4 9 9 6 37 37 27 20 26 29 37 37 29 7 14 8 29 17 12 31 26 29 37 31 27 13 11 8 8 10 30 4 5 14 30 19 7 10 19

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_94367343_94368366
seq2: B6Ng01-006D23.g_68_1084 (reverse)

seq1  CATGGGTATTTTGTTCCCCCTTCTAAGAAAAATCAAAATATCCACACTTC  50
      |||||| |||||||| ||||||||||||||||||||||||  ||||| ||
seq2  CATGGG-ATTTTGTT-CCCCTTCTAAGAAAAATCAAAATAATCACAC-TC  47

seq1  GGTCTTCCTTCTTCTTGAGTTTCATGTGGTGTGTGATTTGTATCTTGGGT  100
      |||| | ||||||| |||||||||||||||||||||||||||||||||||
seq2  GGTCCT-CTTCTTC-TGAGTTTCATGTGGTGTGTGATTTGTATCTTGGGT  95

seq1  ATTCCGAGCTTCTGGGCTAATATTCACTTATCAGTGAGTGTATATCATGT  150
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  A-TCCGAGCTTCTGGGCTAATA-TCACTTATCAGTGAGTGTATATCATGT  143

seq1  GTGTTCCTTTGCTATTGGGTTACCTCACTCAGGAAGTTATCCTCCAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCTTTGCTATTGGGTTACCTCACTCAGGAAGTTATCCTCCAGTTC  193

seq1  CATCCATTTGCCTAAGAATTTCATAAATTCATTGTTTTTAATAGCTGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTTGCCTAAGAATTTCATAAATTCATTGTTTTTAATAGCTGAAT  243

seq1  AGTACTCCATATGTACCACATTTTCTGTATCCATTCCTCTATTGAGGGAC  300
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGTACTCCATATGTACCACATTTTCTGTATCCATTCCTCTATTGAGAGAC  293

seq1  ATCTGGATTCTTTCCAGCTCCTGGCTATTATAAATAAACCTGCTATGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGATTCTTTCCAGCTCCTGGCTATTATAAATAAACCTGCTATGAAT  343

seq1  TTAGTGGAGTCAGGTTGTTGTCACCCAGTATAGCTTCTTGGAATTTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGAGTCAGGTTGTTGTCACCCAGTATAGCTTCTTGGAATTTAGCT  393

seq1  TAGTTCTTCTGGAAGAATGGATAAGTGCACCTAACTTCAAACCATCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTCTGGAAGAATGGATAAGTGCACCTAACTTCAAACCATCTCTC  443

seq1  AAGTCTCCAGTAATGGTGTTTCCATACAGGTACACAGTGTGGAGTAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCCAGTAATGGTGTTTCCATACAGGTACACAGTGTGGAGTAAATA  493

seq1  CATGGTTTAGATATGGTTTATTTCCAGACAAATATTTAATTCATCTTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTTAGATATGGTTTATTTCCAGACAAATATTTAATTCATCTTGGG  543

seq1  CAGATTTTATATGTATTATGAAAGAAAGTTCAGTTGTCCTAATGCCAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTTATATGTATTATGAAAGAAAGTTCAGTTGTCCTAATGCCAGTT  593

seq1  TTTTTAAAAAAGGTTTTATCCATTGGGCATTCTTTGAAACATTTTAGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAAAGGTTTTATCCATTGGGCATTCTTTGAAACATTTTAGCAG  643

seq1  AAAAGTTAACAATATATATGCAAGACTTGCATTAAATATGTGTTTTGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTAACAATATATATGCAAGACTTGCATTAAATATGTGTTTTGTAG  693

seq1  TGCCAGGAATTGATCTTGAGAATTCATGCATGCTAGGGAAGTACTACACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGAATTGATCTTGAGAATTCATGCATGCTAGGGAAGTACTACACT  743

seq1  ACTGATGAATGCCTCTGACTCCTTAAAATGTATTAAGTTATCGAACTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGAATGCCTCTGACTCCTTAAAATGTATTAAGTTATCGAACTAGG  793

seq1  TTGAAATTCCCCACATATATTCAGATTCTAATATCTGAAACATATGAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTCCCCACATATATTCAGATTCTAATATCTGAAACATATGAATA  843

seq1  TTTCAAACATTATTTGCATATTACTAATTTAATAATTTTGAAATGTGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAACATTATTTGCATATTACTAATTTAATAATTTTGAAATGTGGAA  893

seq1  GTTATCCTAGGATTCCCTCCCAAAGACATCATAAGTATCTTTATAGGTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCCTAGGATTCCCTCCCAAAGACATCATAAGTATCTTTATAGGTGA  943

seq1  AGAAAGTATGTACTCATTGGATATGATATGGCTTTGTATATAGAACACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTATGTACTCATTGGATATGATATGGCTTTGTATATAGAACACAA  993

seq1  AAAGCCAAAATATGCAAAGAATTC  1024
      ||||||||||||||||||||||||
seq2  AAAGCCAAAATATGCAAAGAATTC  1017

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information