BAC Information

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BAC

Clone NameB6Ng01-007L18
ChromosomeX (Build37)
Map Location 121,345,407 - 121,495,837
singlet/doubletdoublet
Overlap geneLOC100039828
Upstream geneLOC100039751, LOC100039763, LOC665281, EG625591, LOC665325, EG382265, LOC665364, EG546368, LOC100038940, LOC100038941, EG625699, LOC100038942
Downstream geneEG434843, EG665463, EG665522, LOC100038969, LOC100038978, EG665579, EG665611
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007L18.bB6Ng01-007L18.g
ACCDH844214DH844215
length253924
definitionDH844214|Mus musculus domesticus DNA, BAC clone: B6Ng01-007L18, 5' end.DH844215|Mus musculus domesticus DNA, BAC clone: B6Ng01-007L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,345,407 - 121,345,659)(121,494,914 - 121,495,837)
sequence
taggacagccagggatacacagagaaacactgtctccaaaaattcaacaa
aacacaacaaaataacaacaagaacaacaacaaaacagagttttagagtc
atttttgggttcttgtgtaattctattttttttttttaaggatattaggg
tttttcagggtttggttttttttttttttttttttttttaggctttaacg
gttttttttttaaaatttttgattttttagtattttttgggggggggctg
ggt
gaattctttacatcctctcctacagatacagaatgtcccagtgtccccaa
gggctgcatggagggttgtatggtctcatcacactgtacaaatatggagc
ttgtttggctccctgggagcattttggcagaatcttggctgtttgggacc
tgatgacaagtcaggagggcccttttggctggtaggggatatttgaataa
ttcttgatcagatcgggactttctggagacccgttgtttagagagagcat
ctttcaatcctctgctagaatgagaatgttcagggtcacttttcataaca
ggagaatgatttaatcttcctttctgtgggagagcagatttaagaacatg
tctttgatgctcttccatagagggagataatcctagtggccacctaacag
atggagaaggtctcagaacccctggggaagatgctgatggttctagttca
ctttgtgtatgtgcagaaggcacaagagtccctttggaggactcaggagt
ttctatcacacctagcctatgtgtggaactctcaagagccccttctaagg
atggcaaaggtccttgagctcctggtataggtgtggaaaattttgtctct
gcttgggcaggtatgagcggtgtgaggctcactttgggaatcgtgattgc
atttctttcccttaggactgtaagagatgatctgagcccattttttaatg
gtagaggactttgaaagctctcttggtttaaaggggaagttctgaaatcc
ccttggtcagcagggtcaggtctcaaactcactttactagaagcagattg
catggggcactttgggggagaaggagaacgtctttggctgtctttgtgag
aggacttagctttatgcccttgcttggcagctgtcaaacatggtgaactc
tcctggggagaggaggtggaagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_121345407_121345659
seq2: B6Ng01-007L18.b_49_301

seq1  TAGGACAGCCAGGGATACACAGAGAAACACTGTCTCCAAAAATTCAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAGCCAGGGATACACAGAGAAACACTGTCTCCAAAAATTCAACAA  50

seq1  AACACAACAAAATAACAACAAGAACAACAACAAAACAGAGTTTTAGAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAACAAAATAACAACAAGAACAACAACAAAACAGAGTTTTAGAGTC  100

seq1  ATTTTTGGGTTCTTGTGTAATTCTATTTTTTTTTTTTAAGGATATTAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGGTTCTTGTGTAATTCTATTTTTTTTTTTTAAGGATATTAGGG  150

seq1  TTTTTCAGGGTTTGGTTTTTTTTTTTTTTTTTTTTTTTTAGGCTTTAACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGGGTTTGGTTTTTTTTTTTTTTTTTTTTTTTTAGGCTTTAACG  200

seq1  GTTTTTTTTTTAAGATTTTTGATTTTTTAGTATTTTTTGGGGGGGGGCTG  250
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTAAAATTTTTGATTTTTTAGTATTTTTTGGGGGGGGGCTG  250

seq1  GGT  253
      |||
seq2  GGT  253

seq1: chrX_121494914_121495837
seq2: B6Ng01-007L18.g_68_991 (reverse)

seq1  GACTTCCACCTCCTCTCCCCAGGAGAGTTCAACATGTTTGACAGCTGCCA  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GACTTCCACCTCCTCTCCCCAGGAGAGTTCACCATGTTTGACAGCTGCCA  50

seq1  AAGCAGGGCATAAAGCTAAGTCCTCTCACAAAGACAGCCAAAGACGTTCC  100
      |   ||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGCAAGGGCATAAAGCTAAGTCCTCTCACAAAGACAGCCAAAGACGTTCT  100

seq1  CCTTCTCCCCCAAAGTGCCCCATGCAATCTGCTTCTAGTAAAGTGAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCCCCCAAAGTGCCCCATGCAATCTGCTTCTAGTAAAGTGAGTTT  150

seq1  GAGACCTGACCCTGCTGACCAAGGGGATTTCAGAACTTCCCCTTTAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTGACCCTGCTGACCAAGGGGATTTCAGAACTTCCCCTTTAAACC  200

seq1  AAGAGGGCTTTCAAAGTCCTCTACCATTAAAAAATGGGCTCAGATCATCT  250
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGCTTTCAAAGTCCTCTACCATTAAAAAATGGGCTCAGATCATCT  250

seq1  CTTACAGTCCTAAGGGAAAGAAATGCAATCACGATTCCCAAAGTGAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGTCCTAAGGGAAAGAAATGCAATCACGATTCCCAAAGTGAGCCT  300

seq1  CACACCGCTCATACCTGCCCAAGCAGAGACAAAATTTTCCACACCTATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCGCTCATACCTGCCCAAGCAGAGACAAAATTTTCCACACCTATAC  350

seq1  CAGGAGCTCAAGGACCTTTGCCATCCTTAGAAGGGGCTCTTGAGAGTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCTCAAGGACCTTTGCCATCCTTAGAAGGGGCTCTTGAGAGTTCC  400

seq1  ACACATAGGCTAGGTGTGATAGAAACTCCTGAGTCCTCCAAAGGGACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATAGGCTAGGTGTGATAGAAACTCCTGAGTCCTCCAAAGGGACTCT  450

seq1  TGTGCCTTCTGCACATACACAAAGTGAACTAGAACCATCAGCATCTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTTCTGCACATACACAAAGTGAACTAGAACCATCAGCATCTTCCC  500

seq1  CAGGGGTTCTGAGACCTTCTCCATCTGTTAGGTGGCCACTAGGATTATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTTCTGAGACCTTCTCCATCTGTTAGGTGGCCACTAGGATTATCT  550

seq1  CCCTCTATGGAAGAGCATCAAAGACATGTTCTTAAATCTGCTCTCCCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTATGGAAGAGCATCAAAGACATGTTCTTAAATCTGCTCTCCCACA  600

seq1  GAAAGGAAGATTAAATCATTCTCCTGTTATGAAAAGTGACCCTGAACATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAAGATTAAATCATTCTCCTGTTATGAAAAGTGACCCTGAACATT  650

seq1  CTCATTCTAGCAGAGGATTGAAAGATGCTCTCTCTAAACAACGGGTCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTAGCAGAGGATTGAAAGATGCTCTCTCTAAACAACGGGTCTCC  700

seq1  AGAAAGTCCCGATCTGATCAAGAATTATTCAAATATCCCCTACCAGCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTCCCGATCTGATCAAGAATTATTCAAATATCCCCTACCAGCCAA  750

seq1  AAGGGCCCTCCTGACTTGTCATCAGGTCCCAAACAGCCAAGATTCTGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCCCTCCTGACTTGTCATCAGGTCCCAAACAGCCAAGATTCTGCCA  800

seq1  AAATGCTCCCAGGGAGCCAAACAAGCTCCATATTTGTACAGTGTGATGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTCCCAGGGAGCCAAACAAGCTCCATATTTGTACAGTGTGATGAG  850

seq1  ACCATACAACCCTCCATGCAGCCCTTGGGGACACTGGGACATTCTGTATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATACAACCCTCCATGCAGCCCTTGGGGACACTGGGACATTCTGTATC  900

seq1  TGTAGGAGAGGATGTAAAGAATTC  924
      ||||||||||||||||||||||||
seq2  TGTAGGAGAGGATGTAAAGAATTC  924