BAC Information

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BAC

Clone NameB6Ng01-007L24
ChromosomeX (Build37)
Map Location 47,123,507 - 47,124,660
singlet/doubletsinglet
Overlap genenone
Upstream geneGm595, EG637758, LOC100040295, Enox2, 1100001E04Rik, LOC100041697, Olfr1320, Olfr1321
Downstream geneIgsf1, Olfr1322, LOC100040344, Olfr1323, EG665816, Olfr1324, LOC100041788, 6720401G13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007L24.bB6Ng01-007L24.g
ACCDH844224DH844225
length1,1171,179
definitionDH844224|Mus musculus domesticus DNA, BAC clone: B6Ng01-007L24, 5' end.DH844225|Mus musculus domesticus DNA, BAC clone: B6Ng01-007L24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattttccagaagcccctcatccaagtctggggagagcaggtgg
ctcttgtggtaaccaatctgctgtgtacagaatccttcaggcatttgttg
ctgagggactgggaggcaaccaggtgtcctaactaactaggtctgctcct
tttcttctattgtcgccatagagtgcaagggcaagtgcatagatttagga
ttcagatgaattccgtgttcttaatggtttccccacttgttagctccgtg
cctgagggcaagttacttaatcttactaagctgcaaggcccttatagggt
tctgaggaaaatacatattaagtgcttagcacagagcatgatgcatagag
agcagctaataaatgtaagcttttataatcatgattatcccctgttctta
taaacctactaatgtttggtaagccttaggtatattgatggaattacact
taaccattcttatccatgagtcctctggtaaatttcttcctcttcttggg
agagcccattaagtattcttatttttcatcttctatttttattctttcct
ctctgacagacatttgtggaagattgttgacatttccattaattattatg
gtggatggtagccacacatgttatcaccaccaccaccaccagcaggcctc
taagaatcctcctcctctataagtggtgagctcccggccctatcgctagg
gggagcagcagagctgacacaccttttctccctacaggagctgccctact
gacttacagtacattcaagagagggaccaaaaaaaaaaaaaaaagtacaa
agctttccagcatcttcctcccatcctacactccctcttatgctcaccaa
atcccaagagtctcctacaaatttggagatgtgcttctgctcctttcttt
tctgatgggatgattaaataaataaaggggctggatcacataatcagtca
aatttcccagagcatagagtacccagtgtgaagagacctctaatgtgtat
ggagatgacagccacactcagcatctagacggatgaaccaagaagccaag
atactgctgcctaccacaggttagtcccctgcttgtactgcaaatgaatg
gtgctctatgtcccttc
gaattctttcttcagagacttggaattcttatcatacagaactttcactt
acttacttaaagtaactccaagatattttatattatttgtgactgtcata
aagtgtgttgcttccctaatttctttctcagcctgtttatcctttgtgta
gaggaaggccactgattttttttttttttagttaattttatgtccagcta
ctttgctgaagttgtttatcaggttcaggagttctctggtgtaataagat
taaaaggcaaccaacagatttggaaaacgtctgtaccaatcctaaataca
atagggggctaatatccaatatatataaagaactcaaaaagttgggctcc
agaaaaccaaacaacactatttttaaaatggggtacagagctaaacaatg
gattttcaacgtaggaataccaagtggctgagtagcacctaaaaaatgtt
caacatccttaatcatcaaggaaatacaaatcaaaacaaccctgagattc
cacctcacaccagtcagaatgcctaagttcaaaaactcaggtgacagcag
atgctggcgagaatgtggagaaagaggaacactcctcccctccattgctg
gtgagattacatgcttgtacaaccattctggaaatcaatttagtggttcc
tcagaaaatttggcatagttctaccagaagaaccagcaaaaccactcctg
ggcatatactcagaagatgctccaacatgtaatcggaatacatgctccac
tgtgttcatagcagccttacttataatacccagaagctggaaagaaccca
gatgtccctcaacagaagaatggatgcagaaaatgtggtacatttacaaa
atggagtactatgtagctattacaaacaatgaatttatgaaattcttcaa
caaatggatggatctggaggataccatcctaagtggaggtaaccagtcac
caaagacacacatgatatgcattcactgataagtggatatagcccagatg
ccagatacttctagagtgcacaaaatacccatggatggtaagagaacaag
ttggagacaaagactgaaggatgacatcgagactgtccaatgggatctat
cccataacacaccatcgaaccattggtaatgccagatctggtcaaggcct
gtagctctcttgaaaccggatacgtcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_47123507_47124660
seq2: B6Ng01-007L24.b_43_1159

seq1  GAATTCTATTTTCCAGAAGCCCCTCATCCAAGTCTGGGGAGAGCAGGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTTCCAGAAGCCCCTCATCCAAGTCTGGGGAGAGCAGGTGG  50

seq1  CTCTTGTGGTAACCAATCTGCTGTGTACAGAATCCTTCAGGCATTTGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTGGTAACCAATCTGCTGTGTACAGAATCCTTCAGGCATTTGTTG  100

seq1  CTGAGGGACTGGGAGGCAACCAGGTGTCCTAACTAACTAGGTCTGCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGACTGGGAGGCAACCAGGTGTCCTAACTAACTAGGTCTGCTCCT  150

seq1  TTTCTTCTATTGTCGCCATAGAGTGCAAGGGCAAGTGCATAGATTTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTATTGTCGCCATAGAGTGCAAGGGCAAGTGCATAGATTTAGGA  200

seq1  TTCAGATGAATTCCGTGTTCTTAATGGTTTCCCCACTTGTTAGCTCCGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATGAATTCCGTGTTCTTAATGGTTTCCCCACTTGTTAGCTCCGTG  250

seq1  CCTGAGGGCAAGTTACTTAATCTTACTAAGCTGCAAGGCCCTTATAGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGGCAAGTTACTTAATCTTACTAAGCTGCAAGGCCCTTATAGGGT  300

seq1  TCTGAGGAAAATACATATTAAGTGCTTAGCACAGAGCATGATGCATAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGAAAATACATATTAAGTGCTTAGCACAGAGCATGATGCATAGAG  350

seq1  AGCAGCTAATAAATGTAAGCTTTTATAATCATGATTATCCCCTGTTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTAATAAATGTAAGCTTTTATAATCATGATTATCCCCTGTTCTTA  400

seq1  TAAACCTACTAATGTTTGGTAAGCCTTAGGTATATTGATGGAATTACACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTACTAATGTTTGGTAAGCCTTAGGTATATTGATGGAATTACACT  450

seq1  TAACCATTCTTATCCATGAGTCCTCTGGTAAATTTCTTCCTCTTCTTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATTCTTATCCATGAGTCCTCTGGTAAATTTCTTCCTCTTCTTGGG  500

seq1  AGAGCCCATTAAGTATTCTTATTTTTCATCTTCTATTTTTATTCTTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCATTAAGTATTCTTATTTTTCATCTTCTATTTTTATTCTTTCCT  550

seq1  CTCTGACAGACATTTGTGGAAGATTGTTGACATTTCCATTAATTATTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACAGACATTTGTGGAAGATTGTTGACATTTCCATTAATTATTATG  600

seq1  GTGGATGGTAGCCACACATGTTATCACCACCACCACCACCAGCAGGCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGGTAGCCACACATGTTATCACCACCACCACCACCAGCAGGCCTC  650

seq1  TAAGAATCCTCCTCCTCTATAAGTGGTGAGCTCCCGGCCCTATCGCTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATCCTCCTCCTCTATAAGTGGTGAGCTCCCGGCCCTATCGCTAGG  700

seq1  GGGAGCAGCAGAGCTGACACACCTTTTCTCCCTACAGGAGCTGCCCTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCAGCAGAGCTGACACACCTTTTCTCCCTACAGGAGCTGCCCTACT  750

seq1  GACTTACAGTACATTCAAGAGAGGGACC-AAAAAAAAAAAAAAAGTACAA  799
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GACTTACAGTACATTCAAGAGAGGGACCAAAAAAAAAAAAAAAAGTACAA  800

seq1  AGCTTTCCAGCATCTTCCTCCCATCCTACACTCCCTCTTATGCTCACCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCCAGCATCTTCCTCCCATCCTACACTCCCTCTTATGCTCACCAA  850

seq1  ATCCCAAGAGTCTCCTACAAATTTGGAGATGTGCTTCTGCTCCTTTCTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAGAGTCTCCTACAAATTTGGAGATGTGCTTCTGCTCCTTTCTTT  900

seq1  TCTGATGGGATGATTAAAATAAATTAAAGGGGCTGGAATCACATAAATCA  949
      ||||||||||||||| ||||||| |||||||||||| ||||||| |||||
seq2  TCTGATGGGATGATT-AAATAAA-TAAAGGGGCTGG-ATCACAT-AATCA  946

seq1  GGTCAAAATTTCCCAGAAGGCATAGGAGTACCCAAGTGTGAAGAAGACCT  999
       ||| ||||||||||||  ||||| |||||||| ||||||||| ||||||
seq2  -GTC-AAATTTCCCAGA--GCATA-GAGTACCC-AGTGTGAAG-AGACCT  989

seq1  CCTTAAATGTGTATGGAGATGACAAAGCACAAACTCAGCAATTCTAAGAC  1049
      |    ||||||||||||||||||  ||| || ||||||||  ||| ||||
seq2  C---TAATGTGTATGGAGATGAC--AGC-CACACTCAGCA--TCT-AGAC  1030

seq1  AGAATGAACACAAGAAAGCCAAAGATTACTGCTTTCCCTACACACAGTGT  1099
       | |||||| |||| ||||| |||| ||||||  | ||||| ||||| ||
seq2  -GGATGAAC-CAAG-AAGCC-AAGA-TACTGC--TGCCTAC-CACAG-GT  1071

seq1  TAAGTCCACTGCCTTTGTACTGCAACATGAATAGGGTGCTTCTATTGTCC  1149
      | ||||| ||||  ||||||||||| ||||||  ||||| |||| |||||
seq2  T-AGTCCCCTGC--TTGTACTGCAA-ATGAAT--GGTGC-TCTA-TGTCC  1113

seq1  TCTTC  1154
       ||||
seq2  -CTTC  1117