BAC Information

Click to search

BAC

Clone NameB6Ng01-009O19
ChromosomeX (Build37)
Map Location 28,854,614 - 28,855,482
singlet/doubletsinglet
Overlap geneLOC664964
Upstream geneLOC100039324, LOC100039334, LOC100039096, EG664923, LOC100039364, LOC100039377, LOC100039386, LOC100039127, EG664944, LOC100039423, LOC100039145, LOC664951, LOC100042071, LOC664958
Downstream geneLOC100042087, LOC100039171, LOC100042103, LOC100042109, LOC100042115, LOC100042122, LOC100042135, LOC100042144, LOC664982, LOC100039212, EG664989, LOC664996
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009O19.bB6Ng01-009O19.g
ACCDH845739DH845740
length8701,198
definitionDH845739|Mus musculus domesticus DNA, BAC clone: B6Ng01-009O19, 5' end.DH845740|Mus musculus domesticus DNA, BAC clone: B6Ng01-009O19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggcttagagcaaggagggatagggaagtgcagaccactgtgca
aagtgggcagggctcaagacagtgggattcttaccgtggatgctgtgctc
tgtgcccaccgctgcgtccactggggtgccccctcaggcacaccagacac
tggtgtctgtttgctctttatctgagtcttggcaccatttatatgttaat
taacaccagataatattaatctatatattttgagcggataaaccgaacag
cagaccaggccaaggtggttccacgtgggagaggtttattgtgcagggat
aggggccagcaaagccattagaagggcagagaggaggaaaaagagaaaaa
gaggctggagagaagaaagagaagaaagagtgaggagggggtgatcccct
aatttatatgaaaaatgtcacactggtgagggtggcaactgagccaagtg
gattgtgggattgagggttgttgttctggcaatgtaggtcaagggtcaca
tagttagacaggagcttggagagtcctggtgctaacatttacagccttca
gaatgctccaaactgatttctagaatgaccccacccgtttgaaatcccaa
taagatgttgggattccctttactcagcatcccccaccccagccctccat
tgttggttgttttggtgatctttgctatttttactgtactcagacagatg
gactctttaccctgtccaactaactatattagtgcagaggaggtctgtga
ttggacagggacaagggtcagagctaggagttatgggagaggaggagagt
tcctagagggtagggaggagaaccaagatggctttcaagtggaccctgcg
tggatttactagtcacaaaa
gaattctcacctgaggaataccgaatggccgagaagcacctgaaaaagtg
ttcagcatccttaatcatcagagaaatgcaaatcaaaataaccctgagat
tccacttcacaccagtcagaatggctaagatcataaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcatccattgttggtg
ggattgcaagcttttacaaccactctggaaatcagtctggtggttcctca
taaaattgcacataatactaccggagaatcctgcaatacctcttctgggc
atatatccagaaaatgttccaactggtgagaaggacacatgctcccctat
gttcatagcaggattatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacaaaaaatttggtacatttacttaatg
gtgtactactaagctattaaaaggaatgaatttatgaaattgctaggcaa
atgtttggacctggagggcattatcctgagtgaggtaacacaatcacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagaaac
ttagtatacccgagatgtgagatacaatttgcaaaacacatgaaactgta
gaagaatgaagaccaaagtgtggacactttgccccttcttagcattgaga
ataaacgcccatgaaaggagttacagagacaaagtttggagcagagacga
aaggatggaccatctagagactgccatatccagggattcaccccataatc
agcctccaaacgatgacaccaatgcatacactagcaagcgtttgctgaaa
ggaacttgataatagctgtctcttgtgagactaggctgcggcctagaaaa
cacagaagtggatgctgacagtcagctattggatggatcacagggccccc
aatggaggagctagagaaagtaattcaaggtgcttatagagatctgcaac
tctgtagatgcaacaacatatgactaagtagttcccttgtagctcttgac
tctagctgcatattgtatcaaaagatggccttagttcggcatcacgtgga
agaagtccattgggattgctacctttaattccctagtacatgggaaacgc
tccgggcgaaaaccgggagatgagtgagtgatagatggagtagtgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_28854614_28855482
seq2: B6Ng01-009O19.b_48_916

seq1  GAATTCTGGCTTAGAGCAAGGAGGGATAGGGAAGTGCAGACCACTGTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCTTAGAGCAAGGAGGGATAGGGAAGTGCAGACCACTGTGCA  50

seq1  AAGTGGGCAGGGCTCAAGACAGTGGGATTCTTACCGTGGATGCTGTGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGCAGGGCTCAAGACAGTGGGATTCTTACCGTGGATGCTGTGCTC  100

seq1  TGTGCCCACCGCTGCGTCCACTGGGGTGCCCCCTCAGGCACACCAGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCACCGCTGCGTCCACTGGGGTGCCCCCTCAGGCACACCAGACAC  150

seq1  TGGTGTCTGTTTGCTCTTTATCTGAGTCTTGGCACCATTTATATGTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCTGTTTGCTCTTTATCTGAGTCTTGGCACCATTTATATGTTAAT  200

seq1  TAACACCAGATAATATTAATCTATATATTTTGAGCGGATAAACCGAACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACCAGATAATATTAATCTATATATTTTGAGCGGATAAACCGAACAG  250

seq1  CAGACCAGGCCAAGGTGGTTCCACGTGGGAGAGGTTTATTGTGCAGGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCAGGCCAAGGTGGTTCCACGTGGGAGAGGTTTATTGTGCAGGGAT  300

seq1  AGGGGCCAGCAAAGCCATTAGAAGGGCAGAGAGGAGGAAAAAGAGAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCCAGCAAAGCCATTAGAAGGGCAGAGAGGAGGAAAAAGAGAAAAA  350

seq1  GAGGCTGGAGAGAAGAAAGAGAAGAAAGAGTGAGGAGGGGGTGATCCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGGAGAGAAGAAAGAGAAGAAAGAGTGAGGAGGGGGTGATCCCCT  400

seq1  AATTTATATGAAAAATGTCACACTGGTGAGGGTGGCAACTGAGCCAAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATATGAAAAATGTCACACTGGTGAGGGTGGCAACTGAGCCAAGTG  450

seq1  GATTGTGGGATTGAGGGTTGTTGTTCTGGCAATGTAGGTCAAGGGTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGGGATTGAGGGTTGTTGTTCTGGCAATGTAGGTCAAGGGTCACA  500

seq1  TAGTTAGACAGGAGCTTGGAGAGTCCTGGTGCTAACATTTACAGCCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGACAGGAGCTTGGAGAGTCCTGGTGCTAACATTTACAGCCTTCA  550

seq1  GAATGCTCCAAACTGATTTCTAGAATGACCCCACCCGTTTGAAATCCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTCCAAACTGATTTCTAGAATGACCCCACCCGTTTGAAATCCCAA  600

seq1  TAAGATGTTGGGATTCCCTTTACTCAGCATCCCCCACCCCAGCCCTCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGTTGGGATTCCCTTTACTCAGCATCCCCCACCCCAGCCCTCCAT  650

seq1  TGTTGGTTGTTTTGGTGATCTTTGCTATTTTTACTGTACTCAGACAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTTGTTTTGGTGATCTTTGCTATTTTTACTGTACTCAGACAGATG  700

seq1  GACTCTTTACCCTGTCCAACTAACTATATTAGTGCAGAGGAGGTCTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTTACCCTGTCCAACTAACTATATTAGTGCAGAGGAGGTCTGTGA  750

seq1  TTGGACAGGGACAAGGGGTCAGAGCTAGGAGTTAT-GGAGAGGAGGAGAG  799
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  TTGGACAGGGACAA-GGGTCAGAGCTAGGAGTTATGGGAGAGGAGGAGAG  799

seq1  -TCCTAGAGGGTAGGGAGGAGAACCAAGATGGCTTTGTATGTGTA-CCTG  847
       |||||||||||||||||||||||||||||||||||  | ||| | ||||
seq2  TTCCTAGAGGGTAGGGAGGAGAACCAAGATGGCTTT-CAAGTGGACCCTG  848

seq1  CGTGGCATTTACTAGCCACAAA  869
      ||||| ||||||||| ||||||
seq2  CGTGG-ATTTACTAGTCACAAA  869