BAC Information

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BAC

Clone NameB6Ng01-012P01
ChromosomeX (Build37)
Map Location 132,434,506 - 132,435,096
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040987, Nxf2, B930008K04Rik, EG621246, LOC100040635, Tceal6, EG621322, Pramel3, EG621352, EG331529, EG621380, EG666040, EG666045, AV320801, EG621467, Nxf7, 4930534P07Rik, 1700008I05Rik, 1700129I15Rik, Gprasp1, Gprasp2, Bhlhb9
Downstream geneLOC100041110, 2900062L11Rik, 6530401D17Rik, Bex2, Nxf3, Bex4, Tceal8, Tceal5, Bex1, LOC100040972, Wbp5, Ngfrap1, LOC666180, LOC237048, LOC666196, Kir3dl2, LOC100041079, Kir3dl1, Tceal3, Tceal1, Morf4l2, BC065397, Glra4, LOC100041122, Plp1, Rab9b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012P01.bB6Ng01-012P01.g
ACCDH847887DH847888
length9561,119
definitionDH847887|Mus musculus domesticus DNA, BAC clone: B6Ng01-012P01, 5' end.DH847888|Mus musculus domesticus DNA, BAC clone: B6Ng01-012P01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactttggtcaccagtctttcaaagtgttttcacgggatgatcc
atgtagccaattcaagaaaatactttttaaattctattttcattaaacaa
tttctttgacaatgtcttatatggatataagaaactcgttactcttaccc
tcacattccattgttctcctaccatcagttcccctcccttccctacaagt
ctccttttcacattcatgtcatttggtttggttttgtcactcactgagtt
taaccagacttgattacatgaacatggtttcagaggtgctcactggaact
tgatgggcatatctctgagtatccaactgaaggcaatgctgctcctctcc
cacaatcagctagtagccaatagttcagcaattggaactccacccccaca
agcccttccctgtaacacaggattgattactgccagccccattctttttt
tgtttgtttttcgagacagggtttctctgtatagccctggctgtcctgga
actcactctgtagagcaggctggcctcgaactcagaaatccgccttcctc
tgcctcccaagtgctgggattaaatgcgtgtgccaccattgcccagcctg
ccagccccattcttatggctgaatcatgcccagaagataccatttcacag
tctgtctctctgtcttctggctattacatttttgtcccttcttccacact
attctctgagccttcgaagagatactataaatatcccatttcaggctgag
cactcaactgtcacttattcccatcaccttgagcagccatgaggctgcat
ttactgccattctgtaaagcataggctgagaatagcatttgtctatgggt
ataatcatagatatttagaaggtaatttgaggcataccaatttagtttta
taacaatagtaagttccctcccaaagcccaagacctctcagctatgggac
tgtatt
gaattcaaggttcagccagtgctggtaatggaatagttagccaggggatc
aagaggacagacactgggaccaatttgacttatgtcattgtctctttctc
tttctgagattttttccaacatggcaagatttatttctatttattccata
ttaagtagcatagaaaggaccggtttttccataagccatacatagtcttc
ctttgtatgtccagtctcagaagagaacacttggtctgagcaactcagaa
agtttgtggacccctgctgtgtagcctggtcaaggtcagtcatcagagtc
ccaccagttatttcctggagaataatctttccctctggtgtccttcatct
acctgtgggtttgagctgtccattttttttttatctaccatggaatctca
ggcagcactgggtcgggtatgtcttcggaatatcaataggtcccactggt
cttagggctatttgttagacaaccaggtcaacagcccagcagtagaagac
agtacttcataggggaaaacaaatagccactcgcagggctgtttggtata
tatacaggtctgtatatatggtggtggactttcttttcctcatctgagag
cttgggttagatctgtattgctctctgggctgaggtacctgtcttggacc
cagatcttttcagttaaagtaagtactgcagcttccacattcttagttcc
atctttcatcttgtgacagtcacggatgagcatctgcaggttgtcatcag
gcaagaaggtattgatagcgtgattttcttaaaactatattctagggtga
ggcaggaatagggcctgataggggttcacacaggcactagacagcttagc
attctggtgttcctcagaggagggtctcagccacatcctgggggtactct
gagcataagatcctaattcagagttaacttttttgcttgtttgttttttt
cattagaccaacagcaccaccactgctctaagacaggtgaaccatcctgt
ggctgcattgtcacaattgaacgtatggttacagggcgttcatggaccaa
ggttggataaacctctaactctgtcagaaagaatgataaaggtttagaaa
tctgggaggttgaagccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_132434506_132435096
seq2: B6Ng01-012P01.b_43_633 (reverse)

seq1  CAATGGTGGCACACGCATTTAATCCCAGCACTTGGGAGGCAGAGGAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTGGCACACGCATTTAATCCCAGCACTTGGGAGGCAGAGGAAGGC  50

seq1  GGATTTCTGAGTTCGAGGCCAGCCTGCTCTACAGAGTGAGTTCCAGGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTGAGTTCGAGGCCAGCCTGCTCTACAGAGTGAGTTCCAGGACA  100

seq1  GCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACAAACAAAAAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACAAACAAAAAAAGAA  150

seq1  TGGGGCTGGCAGTAATCAATCCTGTGTTACAGGGAAGGGCTTGTGGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCTGGCAGTAATCAATCCTGTGTTACAGGGAAGGGCTTGTGGGGGT  200

seq1  GGAGTTCCAATTGCTGAACTATTGGCTACTAGCTGATTGTGGGAGAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCCAATTGCTGAACTATTGGCTACTAGCTGATTGTGGGAGAGGAG  250

seq1  CAGCATTGCCTTCAGTTGGATACTCAGAGATATGCCCATCAAGTTCCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTGCCTTCAGTTGGATACTCAGAGATATGCCCATCAAGTTCCAGT  300

seq1  GAGCACCTCTGAAACCATGTTCATGTAATCAAGTCTGGTTAAACTCAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCTCTGAAACCATGTTCATGTAATCAAGTCTGGTTAAACTCAGTG  350

seq1  AGTGACAAAACCAAACCAAATGACATGAATGTGAAAAGGAGACTTGTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAAAACCAAACCAAATGACATGAATGTGAAAAGGAGACTTGTAGG  400

seq1  GAAGGGAGGGGAACTGATGGTAGGAGAACAATGGAATGTGAGGGTAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGGGGAACTGATGGTAGGAGAACAATGGAATGTGAGGGTAAGAG  450

seq1  TAACGAGTTTCTTATATCCATATAAGACATTGTCAAAGAAATTGTTTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGAGTTTCTTATATCCATATAAGACATTGTCAAAGAAATTGTTTAAT  500

seq1  GAAAATAGAATTTAAAAAGTATTTTCTTGAATTGGCTACATGGATCATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAGAATTTAAAAAGTATTTTCTTGAATTGGCTACATGGATCATCC  550

seq1  CGTGAAAACACTTTGAAAGACTGGTGACCAAAGTTGAATTC  591
      |||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAAAACACTTTGAAAGACTGGTGACCAAAGTTGAATTC  591