BAC Information

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BAC

Clone NameB6Ng01-013F19
ChromosomeX (Build37)
Map Location 72,772,406 - 72,861,973
singlet/doubletdoublet
Overlap geneVbp1, Rab39b
Upstream geneEG245472, Olfr1326-ps1, Olfr1325, EG434797, LOC385383, EG667379, LOC667382, LOC546321, LOC667387, EG628518, Olfr1327-ps1, LOC628637, LOC667413, LOC100041594, LOC627775, EG546325, LOC100041017, EG628573, LOC100041642, LOC667437, EG667446, LOC669291, Gab3, Dkc1, Mpp1, EG547412, 4930428E23Rik, EG667190, F8, LOC572559, LOC667218, Fundc2, Mtcp1, Brcc3, LOC667496
Downstream geneEG635243, Pls3, LOC635275, EG635295, LOC667537, LOC385472, LOC100041147, EG238829, Magea7, 4930428D18Rik, EG544974, 4930468A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013F19.bB6Ng01-013F19.g
ACCDH848193DH848194
length248841
definitionDH848193|Mus musculus domesticus DNA, BAC clone: B6Ng01-013F19, 5' end.DH848194|Mus musculus domesticus DNA, BAC clone: B6Ng01-013F19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,772,406 - 72,772,653)(72,861,187 - 72,861,973)
sequence
gaattctttttagcttttctagctgtaactgcccaagttatatttttaga
acacatgatagcatgtcatttttctgatgaaggttccatcatttcctctg
tcaaaagctaggaccacttctggtacaatgtgacttttacttagtctcac
agatatcgtttcttgtaaacgtggggttttcctccttgcttttttttttt
taaagaattgtgtatgagtgagtgagtgtatgtggtgtatgtatgtga
gaattcaaattttaaatagactattgggaggtggtacaactatggaaagt
ggggcctagctagaaaagtaggtctcagggaatatacttttcaagggtca
atatagcttttctttttctccttcctgtttctcctgagtgtcattaggta
gacagggtttctcacttctgtctttctgccaaggggttttcctcctttgc
aataagattaaaaaaaaaaaaagtagagcctctaaaaccatgaacaaaat
gaatattacattttttaaaattgtctttctcagatactagtcaagtgttg
aaacctgagacaaatggctgaggtgcctatttaacatatcaaagtggacc
tggcagcaagtttttccagcaatccctcagttacaggtacctgttacagg
gattcctggctgatattcctgccccctaaactaactctccagcccagggg
cttgtactgcccttcccccacagctgcccatgcctatgtaatccagccat
tttggttacctgctttccttttacctttgggcctcctggcttctgcaact
ggttcccctatcttccctctcccttcccctccccatctcccacaaggcct
ggctcagaatcatgtacattctgaactctcccagagttctctgcatctcc
ttatgctctcccacatatctataataagctttctcctgcacaccatacct
aggaacagtcatgtttccttttttttttctatttttctttttcattcagc
cagtatataaaaattgagtatttttatacattactggtagaaatccttaa
tgttaaaaccattttggaaattgtggtcaccaattttcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_72772406_72772653
seq2: B6Ng01-013F19.b_43_290

seq1  GAATTCTTTTTAGCTTTTCTAGCTGTAACTGCCCAAGTTATATTTTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTAGCTTTTCTAGCTGTAACTGCCCAAGTTATATTTTTAGA  50

seq1  ACACATGATAGCATGTCATTTTTCTGATGAAGGTTCCATCATTTCCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGATAGCATGTCATTTTTCTGATGAAGGTTCCATCATTTCCTCTG  100

seq1  TCAAAAGCTAGGACCACTTCTGGTACAATGTGACTTTTACTTAGTCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGCTAGGACCACTTCTGGTACAATGTGACTTTTACTTAGTCTCAC  150

seq1  AGATATCGTTTCTTGTAAACGTGGGGTTTTCCTCCTTGCTTTTTTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCGTTTCTTGTAAACGTGGGGTTTTCCTCCTTGCTTTTTTTTTTT  200

seq1  TAAAGAATTGTGTATGAGTGAGTGAGTGTATGTGGTGTATGTATGTGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATTGTGTATGAGTGAGTGAGTGTATGTGGTGTATGTATGTGA  248

seq1: chrX_72861187_72861973
seq2: B6Ng01-013F19.g_65_852 (reverse)

seq1  ACCAGTAATGTAT-AAAATACTCAATTTTTATATACTGGCTGAATGAAAA  49
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACCAGTAATGTATAAAAATACTCAATTTTTATATACTGGCTGAATGAAAA  50

seq1  AGAAAAATAGAAAAAAAAAAGGAAACATGACTGTTCCTAGGTATGGTGTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATAGAAAAAAAAAAGGAAACATGACTGTTCCTAGGTATGGTGTG  100

seq1  CAGGAGAAAGCTTATTATAGATATGTGGGAGAGCATAAGGAGATGCAGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAAAGCTTATTATAGATATGTGGGAGAGCATAAGGAGATGCAGAG  150

seq1  AACTCTGGGAGAGTTCAGAATGTACATGATTCTGAGCCAGGCCTTGTGGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGGAGAGTTCAGAATGTACATGATTCTGAGCCAGGCCTTGTGGG  200

seq1  AGATGGGGAGGGGAAGGGAGAGGGAAGATAGGGGAACCAGTTGCAGAAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGGAGGGGAAGGGAGAGGGAAGATAGGGGAACCAGTTGCAGAAGC  250

seq1  CAGGAGGCCCAAAGGTAAAAGGAAAGCAGGTAACCAAAATGGCTGGATTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGCCCAAAGGTAAAAGGAAAGCAGGTAACCAAAATGGCTGGATTA  300

seq1  CATAGGCATGGGCAGCTGTGGGGGAAGGGCAGTACAAGCCCCTGGGCTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGCATGGGCAGCTGTGGGGGAAGGGCAGTACAAGCCCCTGGGCTGG  350

seq1  AGAGTTAGTTTAGGGGGCAGGAATATCAGCCAGGAATCCCTGTAACAGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAGTTTAGGGGGCAGGAATATCAGCCAGGAATCCCTGTAACAGGT  400

seq1  ACCTGTAACTGAGGGATTGCTGGAAAAACTTGCTGCCAGGTCCACTTTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAACTGAGGGATTGCTGGAAAAACTTGCTGCCAGGTCCACTTTGA  450

seq1  TATGTTAAATAGGCACCTCAGCCATTTGTCTCAGGTTTCAACACTTGACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAAATAGGCACCTCAGCCATTTGTCTCAGGTTTCAACACTTGACT  500

seq1  AGTATCTGAGAAAGACAATTTTAAAAAATGTAATATTCATTTTGTTCATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTGAGAAAGACAATTTTAAAAAATGTAATATTCATTTTGTTCATG  550

seq1  GTTTTAGAGGCTCTACTTTTTTTTTTTTTAATCTTATTGCAAAGGAGGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGAGGCTCTACTTTTTTTTTTTTTAATCTTATTGCAAAGGAGGAA  600

seq1  AACCCCTTGGCAGAAAGACAGAAGTGAGAAACCCTGTCTACCTAATGACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTTGGCAGAAAGACAGAAGTGAGAAACCCTGTCTACCTAATGACA  650

seq1  CTCAGGAGAAACAGGAAGGAGAAAAAGAAAAGCTATATTGACCCTTGAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGAAACAGGAAGGAGAAAAAGAAAAGCTATATTGACCCTTGAAA  700

seq1  AGTATATTCCCTGAGACCTACTTTTCTAGCTAGGCCCCACTTTCCATAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATTCCCTGAGACCTACTTTTCTAGCTAGGCCCCACTTTCCATAGT  750

seq1  TGTACCACCTCCCAATAGTCTATTTAAAATTTGAATTC  787
      ||||||||||||||||||||||||||||||||||||||
seq2  TGTACCACCTCCCAATAGTCTATTTAAAATTTGAATTC  788