BAC Information

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BAC

Clone NameB6Ng01-013N09
ChromosomeX (Build37)
Map Location 128,025,288 - 128,160,110
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665773, LOC665799, LOC670449
Downstream geneLOC245600, EG631264
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013N09.bB6Ng01-013N09.g
ACCDH848549DH848550
length1,119343
definitionDH848549|Mus musculus domesticus DNA, BAC clone: B6Ng01-013N09, 5' end.DH848550|Mus musculus domesticus DNA, BAC clone: B6Ng01-013N09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,158,965 - 128,160,110)(128,025,288 - 128,025,630)
sequence
gaattcatttgtaatattaaaaaaaaaaattgtgcttgactttttttttt
ttcagagaatcaagttgcttctttggtcgtggaatgctcggatgatcaaa
aaggaacctggagtaaacggctgaaatgaaatataaataaaagaatggcc
cttggtctgtgaaagctcagctatctgaggcagcagtggggctatctcca
gaaaaggtgtgttgatcagaaaccagtcctaagcttgggcccatgatttg
actctgagtcatgttttcttggctcccagacaccccttccccagcactcc
tctccaagctgaggctggtctttgccaacatggagggaaggtcccttgga
gctagagttaaagacgtttgagggatgcccaacttggtacatgggtcctg
tgattcaaaatccagtcttcatggttgagtattgaacactcttaaaacaa
ttagatatatctccagctcttgcattgtatacctttgtagaacttgggat
tagggtttatctatttgtaatgtttatttttaactgtaaaaatcaaatga
ttgccactgatgagaagttgacatctggcagatcttacactttaacaact
aaaactactttagatatcaacaccaccaatgagtataataaatctctgat
tgaggtaaagaaaagatacaaagttactaaggatcccatagtacaaaaat
tggcatgtacaaagtttcctgagtacttcatatgtattcatacataagct
cccaaaaataatactagtagacacaataaaaaaatcacaacagtaacatg
tttttatctaaccaaaggacatgacagtggtgcccttataaaaggaaaat
atgttttaaatatactaacctatactttagtcaaatagtaaatatatata
ttgatatcctcatctcatattcctgttattgtttcagtagggcctgctaa
aacaaagaatcatccattcttttgctgaatagaatgtagagctagtagta
gcaatctccctatgtataagagaaaaaaatagtatgtatttctcctgact
gtgttcacaacttattaggaatagtctttatctactaaagatgatcatat
agtctaccagagttaacaa
tgtacatttgagaaattagcaaaaaaacagttggtgcttggtcctgagaa
atagttcaccatcaaaaccccttactgtagatcagttgttgccaaggcta
tgttattattcgtactttcccaaatatctacatttaccagatttaaaata
gatgtttttttaaaagtctggatttcatctcagatttattgaatcagaat
ccacacttactcccttccttctcttttgcctttgactttttttttgtgtg
tgggggggtgggggcgcggagacaagacacactcctgccgttgcccacac
ctcgctgcttgtattaaaactatgcaggatagagacagcgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_128158965_128160110
seq2: B6Ng01-013N09.b_46_1164 (reverse)

seq1  TTGTTTACTCTGTGTAGACATATATGATCAATTCTCTTAGGTAGATAAAA  50
      ||||| |||||| |||||| ||||||||||    ||||  |||||| |||
seq2  TTGTTAACTCTG-GTAGAC-TATATGATCA----TCTTTAGTAGAT-AAA  43

seq1  GACTATTCTCTTATTTAGTTTGGTGAACCACAAGTCAAGGAGAAATTAAA  100
      ||||||  || || | ||||  ||||| ||| |||| |||||||||   |
seq2  GACTAT--TCCTAATAAGTT--GTGAA-CAC-AGTC-AGGAGAAAT---A  83

seq1  CATTACTATTTTTTTTCTCTTATACATTAGGGAAGATTTGCTACTTACTA  150
      || ||||| ||||||||||||||||| ||||| ||| ||||||| |||||
seq2  CA-TACTA-TTTTTTTCTCTTATACA-TAGGG-AGA-TTGCTAC-TACTA  127

seq1  GGCTCTACCAATTCTATTCAGCAAAAGAATGGAATGATTCTTTGTTTTAG  200
       |||||||  |||||||||||||||||||||| |||||||||||||||||
seq2  -GCTCTAC--ATTCTATTCAGCAAAAGAATGG-ATGATTCTTTGTTTTAG  173

seq1  CAGGCCCTACTGAAACAATAACAGGAATATGAGATGAGGATATCAATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCTACTGAAACAATAACAGGAATATGAGATGAGGATATCAATATA  223

seq1  TATATTTACTATTTGACTAAAGTATAGGTTAGTATATTTAAAACATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTACTATTTGACTAAAGTATAGGTTAGTATATTTAAAACATATTT  273

seq1  TCCTTTTATAAGGGCACCACTGTCATGTCCTTTGGTTAGATAAAAACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTATAAGGGCACCACTGTCATGTCCTTTGGTTAGATAAAAACATG  323

seq1  TTACTGTTGTGATTTTTTTATTGTGTCTACTAGTATTATTTTTGGGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTGTGATTTTTTTATTGTGTCTACTAGTATTATTTTTGGGAGCT  373

seq1  TATGTATGAATACATATGAAGTACTCAGGAAACTTTGTACATGCCAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGAATACATATGAAGTACTCAGGAAACTTTGTACATGCCAATTT  423

seq1  TTGTACTATGGGATCCTTAGTAACTTTGTATCTTTTCTTTACCTCAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTATGGGATCCTTAGTAACTTTGTATCTTTTCTTTACCTCAATCA  473

seq1  GAGATTTATTATACTCATTGGTGGTGTTGATATCTAAAGTAGTTTTAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTATTATACTCATTGGTGGTGTTGATATCTAAAGTAGTTTTAGTT  523

seq1  GTTAAAGTGTAAGATCTGCCAGATGTCAACTTCTCATCAGTGGCAATCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGTGTAAGATCTGCCAGATGTCAACTTCTCATCAGTGGCAATCAT  573

seq1  TTGATTTTTACAGTTAAAAATAAACATTACAAATAGATAAACCCTAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTACAGTTAAAAATAAACATTACAAATAGATAAACCCTAATCC  623

seq1  CAAGTTCTACAAAGGTATACAATGCAAGAGCTGGAGATATATCTAATTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCTACAAAGGTATACAATGCAAGAGCTGGAGATATATCTAATTGT  673

seq1  TTTAAGAGTGTTCAATACTCAACCATGAAGACTGGATTTTGAATCACAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAGTGTTCAATACTCAACCATGAAGACTGGATTTTGAATCACAGG  723

seq1  ACCCATGTACCAAGTTGGGCATCCCTCAAACGTCTTTAACTCTAGCTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGTACCAAGTTGGGCATCCCTCAAACGTCTTTAACTCTAGCTCCA  773

seq1  AGGGACCTTCCCTCCATGTTGGCAAAGACCAGCCTCAGCTTGGAGAGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCTTCCCTCCATGTTGGCAAAGACCAGCCTCAGCTTGGAGAGGAG  823

seq1  TGCTGGGGAAGGGGTGTCTGGGAGCCAAGAAAACATGACTCAGAGTCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGGAAGGGGTGTCTGGGAGCCAAGAAAACATGACTCAGAGTCAAA  873

seq1  TCATGGGCCCAAGCTTAGGACTGGTTTCTGATCAACACACCTTTTCTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGCCCAAGCTTAGGACTGGTTTCTGATCAACACACCTTTTCTGGA  923

seq1  GATAGCCCCACTGCTGCCTCAGATAGCTGAGCTTTCACAGACCAAGGGCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCCCCACTGCTGCCTCAGATAGCTGAGCTTTCACAGACCAAGGGCC  973

seq1  ATTCTTTTATTTATATTTCATTTCAGCCGTTTACTCCAGGTTCCTTTTTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTATTTATATTTCATTTCAGCCGTTTACTCCAGGTTCCTTTTTG  1023

seq1  ATCATCCGAGCATTCCACGACCAAAGAAGCAACTTGATTCTCTGAAAAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCGAGCATTCCACGACCAAAGAAGCAACTTGATTCTCTGAAAAAA  1073

seq1  AAAAAAGTCAAGCACAATTTTTTTTTTTAATATTACAAATGAATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTCAAGCACAATTTTTTTTTTTAATATTACAAATGAATTC  1119

seq1: chrX_128025288_128025630
seq2: B6Ng01-013N09.g_71_413

seq1  TGTACATTTGAGAAATTAGCAAAAAAACAGTTGGTGCTTGGTCCTGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATTTGAGAAATTAGCAAAAAAACAGTTGGTGCTTGGTCCTGAGAA  50

seq1  ATAGTTCACCATCAAAACCCCTTACTGTAGATCAGTTGTTGCCAAGGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCACCATCAAAACCCCTTACTGTAGATCAGTTGTTGCCAAGGCTA  100

seq1  TGTTATTATTCGTACTTTCCCAAATATCTACATTTACCAGATTTAAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTATTCGTACTTTCCCAAATATCTACATTTACCAGATTTAAAATA  150

seq1  GATGTTTTTTTAAAAGTCTGGATTTCATCTCAGATTTATTGAATCAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTTTTAAAAGTCTGGATTTCATCTCAGATTTATTGAATCAGAAT  200

seq1  CCACACTTACTCCCTTCCTTCTCTTTTGCCTTTGACTTTTTTTTTGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTTACTCCCTTCCTTCTCTTTTGCCTTTGACTTTTTTTTTGTGTG  250

seq1  TGGGGGGGTGGGGGCGCGGAGACAAGACACACTCCTGCCGTTGCCCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGGTGGGGGCGCGGAGACAAGACACACTCCTGCCGTTGCCCACAC  300

seq1  CTCGCTGCTTGCAGTAAAACTATGCAGGATAGAGACAGCGTAG  343
      ||||||||||| | |||||||||||||||||||||||||||||
seq2  CTCGCTGCTTGTATTAAAACTATGCAGGATAGAGACAGCGTAG  343